Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3194 |
Symbol | |
ID | 6162446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3535193 |
End bp | 3536122 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641665968 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001792217 |
Protein GI | 171059868 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0270844 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGCC TGCATACCGC CTGGTTCGAA GGCTTCTCAC CCCAGCAGCA TGCAGTCAAC GGCGTGCAGC TGTTTGCCCG GGTCGGCGGA CGCCCGGCCC ACGACAGCAG CGCGCCGCCC CTGCTGCTGC TGCACGGTTT TCCGCAAACG CATGCGATGT GGCACCGGGT CGCGCAGCAG CTGGCGCCGC ACTTCCGCCT GGTGCTGCCC GATCTGCGCG GCTACGGCGA CTCCGACAAG CCACCCGGCG ACACCGACCA CGGCAACTAC AGCAAGCGTG CGATGGCCGC CGACCTGGTG CAGCTCATGA AGCAGCTCGG CCACCGGCGT TTCCTGGTCT GCGGCCATGA CCGCGGCGCA CGCGTGGCGC ACCGCATGGC GCTCGACTTC CCGGAGTGCG TCGACCGCCT GTGCCTGATC GACATCGTGC CCACGCTGAC GATGTACGAG CGCACCGACA TGGCCTTTGC CACCGCCTAC TACCACTGGT TCCACCTGAT CCAGCCGGCG CCGCTGCCCG AACGCATGAT CGGCGGCAAC GCCCGCTACT ACCTGCACGC CAAGCTCGGC GGCTGGGGCA CCGACGGGCT CGATCACGTC GAGCCGCCGG CGCTGCTCGA CTACGAACGC TGCTTCTGCA CCGCCCAGGG CATCCACGCT GCGTGTGAGG ATTACCGCGC CAGCGCCAGC ATCGACTTGC AGCATGATCG GCAGTCGCAC CAGGCCGGTC ACAAGGTCGC TTGCCCGGTC CATGTGCTGT GGGGCGAGCG GGGCGTGATC CACCGCCTGT TCGATCCGCT GGCCGACTGG GGCGCGGTCT GCGAAGGCCC GGTCACCGGC GAATCGCTGC CAGCCGGCCA CTTCATCCCC GAAGAGCTTC CCGAAGCCAC GGCTCTGGCG CTGCGCCGGT TCCTGTCGGC CGAGTGCTAG
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Protein sequence | MSGLHTAWFE GFSPQQHAVN GVQLFARVGG RPAHDSSAPP LLLLHGFPQT HAMWHRVAQQ LAPHFRLVLP DLRGYGDSDK PPGDTDHGNY SKRAMAADLV QLMKQLGHRR FLVCGHDRGA RVAHRMALDF PECVDRLCLI DIVPTLTMYE RTDMAFATAY YHWFHLIQPA PLPERMIGGN ARYYLHAKLG GWGTDGLDHV EPPALLDYER CFCTAQGIHA ACEDYRASAS IDLQHDRQSH QAGHKVACPV HVLWGERGVI HRLFDPLADW GAVCEGPVTG ESLPAGHFIP EELPEATALA LRRFLSAEC
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