| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3192 |
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| Symbol | |
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| ID | 6162794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3531359 |
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| End bp | 3534160 |
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| Gene Length | 2802 bp |
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| Protein Length | 933 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641665966 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792215 |
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| Protein GI | 171059866 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00191616 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCGCGC TCGCGGTCGT CAACAGCAAC CTGCGCTTCG TCGGCGGGCC GCTGCTGCTG
GGCCACTACC TGGGCGGGCG GCTGACCGGC ACCGAGCGCG CGATGGACCG CCTGATCGGC
GGCACCATGG CGCAGAGCCT GGCCAGCGGC CATTACCCGC ACGCAGCGGG CATGGTCGAC
GTGTTCGTCA ACACCCGCGT GCAGGCGGGC CAGCGCTGGC TGCAGCCGCG TCCGGCGGCG
GTGATCGTCG TGGGTCTGGG CGCCGAGGGC GAACTGCGGG CCGGCGACCT GAGCGAATCG
GTCAGCCAGG GTGTGCTGGC CTACGCCAAG CGCCTGCATG AAACGCGGCA CGCAACCGGG
CCCACGAGCG GTCAGCCGCC GGCTCCCTTC AGCCTGTCGA GCACCGCGAT CGGCAGCGGC
GGCAGCGGCA TCCAGGTCGG CACCGCGGTG CAGGCGATCG CGCGCGGCGT CGATGCCGCC
AACCGCAAGC TCGCCGCCAG CGGCTGGCCG CAGGTCGACG AGCTGCGGCT GGTCGAGCTC
TACCTCGACC GCGCCACCGA GGCACATCAC GCGCTGCGTG CGCTGGCGGT GTCGCGGCCC
GATCGTTACG CGGTCGAGCC CGCCGTGCGG CCGGGCGAAG GCGCGCACCG GCGCCCGCCC
GACACCGGCT ACCGCGGCAC CGGCTACGAC TTCATCAGCG CCGTGCAGCG GCTCGACGAG
CACGGCCAGG CGCTGATCGA ATACACCCTC GACACCCCGC GCGCGCGCAG CGAGGTGCGC
GCGCAGAGCA CCCAGGCCGC GCTGGTCGAC GAGCTGGTGC GCCAGGGCGC CGACGCCGCC
AGCGCCGACC TGCAGCTGCG CCACACGCTG TTCGACCTGC TGGTGCCGGT CGAGCTGGAG
CCGTTTCTCA ACAGCTCGAA CGAGCTGCTG CTGCACCTCA ACGGCGACAG CGCGCGCATC
CCGTGGGAGC TGCTCGACGC CAGCCCGGTC GCGGCACCCG ACGTGAACGC TGAGGCCGAC
GCCGCACGCC CGAGCGCCGT GCCGCCGTGG GCGATCCGCT GCAAGCTGCT GCGCAAGCTG
CGCCTCGAGC GCTTCCGCAG CCGCCCGGTC GACGCCCAGG ACGACGACCT GACGCTGGTG
ATCGGCGCGC CGGCCTGCGA CCCGGATCTC TACCCGGCGC TGCCCGGCGC GGAGGCCGAG
GCCGAGGCGG TGGCGGCGGT CTTCGGCGCC GAGCCGCTGA TCGGCAGCCC CGCCACCCAG
CTGATCAACG TCCTGCACCA GCGGCCGTGG CGCATCGTGC ACATCGCCGG CCACGGCGAG
ATCCGCGCCG ACGGCAGCAG CGGCGTGGTG CTGTCCAACG GCGCCCGCCT CGGCGCCAGC
GAGATCGCCG CGCTGCGCGT GGTGCCCGAG CTGGTGTTCG TCAACTGCTG CCACCTCGGC
CGGCTCGACG GCGCGGCGGC CGACGCCGGC CGGCGCATCG GCGTGCACGG CAGCGCGCCG
GCGCAATACG CCGCCACCGT GGCACAGGCG CTGATCGCGA TCGGCGTGCG CTGCGTGGTG
GCGGCCGGCT GGGCGGTCGA AGACGGTGCC GCCAACACCT TCGCCAGCGT GTTCTACGCC
CGCCTGCGCG CCGGCGACCG CTTCATCGAT GCCGTGGCGC TGGCGCGCGA ACAGGCCTGG
CGCCTGCAGC CCGAGGGCAA CACCTGGGCC GCCTACCAGT GTTACGGCGA GCCCGACTGG
CGCTACGCCG CCGAGCCGGC CGGCGGCACC GAGCCGATCG TGCCGACGCT GGTGAGCGCG
CCGGCGCTGT GCCTGTGGCT CGAATCGGCC GCGATCGAGG CCCGCCTGAT CGAAGCCGGC
AGCGCCGGCC AGGCCTGGCG CGAACGCCAG CTCGGCCTGC TGCGCGAGAC CGAAACCGCC
TACCGCCCGA TCTGGGGCAG CCAGGGCGCC GTGGCCGAGT GCTTCGGCCT GGCCTATGCC
GAGCTGGGCG ACATCGCCAG CGCCATCGCC TGGTACCGGC GCGCCACCGA GGCCGAGGAC
GGCAGCGCCA GCCTGCGCGC GATCGAACGC TGGGCCCATC TGCGGGTGCG CCAGGCCGAG
TCGATGGCCG ATGTGACGCA GGCCCGCGTG CAGCTGCTGT CGGCGATCCG GACGATCGAG
CGGCTCTGCC AGGCCGGCGA GCCGGCCGAC GGTGCTGCAG CGGCAGGCAA AACCGACGAG
GGCGACGAGG GCGACGCCCC GACCGCCGCC ACCGTCGAGC GCCTGAGCCT GCTCGGCTCG
GCGTTCAAGC GCCTGACGCT GCTTGAAGAA CGCGCCGGCC AGGGCGCCGC CGCGTTGGCC
GCGCTGCAAC GCTGCGTCGG CCACTACCGC CAGGCCGAAC GGCGTGCCTG GACGCTGTTC
TCGGCCGGCC TGGCGGGCAC GCCGTACTTC CCGGCGATCA ACGCGCTCGC CGCCGGCCTG
CGGCTGGCGA TCGTCAGCGG TGCGCCGGCC ACGCTGGACG AGGCCGCGCT CAGCCGGCTC
GACGCCGCGC TGGCGGCGCA GGCCGACAGC GGCGAAGACC TGCACAGCCT GCTCGCGCCG
ATCGAGTTCG AGCTACTCAA GGCGGTGGCA GCCGGCGAGC TGGCCCGGCG CCAGGCCGGC
CTGCAGGCCG CGCTGCTGGC CCTGCTCGAA CGGGCGCCGA CCCACCGCGC CTGGGGTTCG
GTGCGGTTCC AGCTGCACTT CCTGCTGGCA CCGCTGGCCG CGCAAGGCAA GGGCGCCGAA
GCCGACGCCG CACGCGCGCT GCTCGACGCG CTGGCGGCCT GA
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| Protein sequence | MLALAVVNSN LRFVGGPLLL GHYLGGRLTG TERAMDRLIG GTMAQSLASG HYPHAAGMVD
VFVNTRVQAG QRWLQPRPAA VIVVGLGAEG ELRAGDLSES VSQGVLAYAK RLHETRHATG
PTSGQPPAPF SLSSTAIGSG GSGIQVGTAV QAIARGVDAA NRKLAASGWP QVDELRLVEL
YLDRATEAHH ALRALAVSRP DRYAVEPAVR PGEGAHRRPP DTGYRGTGYD FISAVQRLDE
HGQALIEYTL DTPRARSEVR AQSTQAALVD ELVRQGADAA SADLQLRHTL FDLLVPVELE
PFLNSSNELL LHLNGDSARI PWELLDASPV AAPDVNAEAD AARPSAVPPW AIRCKLLRKL
RLERFRSRPV DAQDDDLTLV IGAPACDPDL YPALPGAEAE AEAVAAVFGA EPLIGSPATQ
LINVLHQRPW RIVHIAGHGE IRADGSSGVV LSNGARLGAS EIAALRVVPE LVFVNCCHLG
RLDGAAADAG RRIGVHGSAP AQYAATVAQA LIAIGVRCVV AAGWAVEDGA ANTFASVFYA
RLRAGDRFID AVALAREQAW RLQPEGNTWA AYQCYGEPDW RYAAEPAGGT EPIVPTLVSA
PALCLWLESA AIEARLIEAG SAGQAWRERQ LGLLRETETA YRPIWGSQGA VAECFGLAYA
ELGDIASAIA WYRRATEAED GSASLRAIER WAHLRVRQAE SMADVTQARV QLLSAIRTIE
RLCQAGEPAD GAAAAGKTDE GDEGDAPTAA TVERLSLLGS AFKRLTLLEE RAGQGAAALA
ALQRCVGHYR QAERRAWTLF SAGLAGTPYF PAINALAAGL RLAIVSGAPA TLDEAALSRL
DAALAAQADS GEDLHSLLAP IEFELLKAVA AGELARRQAG LQAALLALLE RAPTHRAWGS
VRFQLHFLLA PLAAQGKGAE ADAARALLDA LAA
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