| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3188 |
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| Symbol | |
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| ID | 6162790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3526060 |
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| End bp | 3527088 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665962 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792211 |
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| Protein GI | 171059862 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00153473 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCTGC ACGAAGAGTC GATCCCCTTC ACCGCCGGCG ACGGCCTGGC GCTCAACCTG
AAGCGGGTGC GCAGCCGCAG CAGACCCCCC TCGCGCGGCC CGGTGCTGCT GGTGCATGGC
GCCGGGGTGC GTGCCGACAT CTTCCGCCCG CCGCTGCCGG TCACCTTCGT CGACGCGCTG
GTGGCCGCCG GCCACGACGT CTGGCTCGAG AACTGGCGTG CCAGCATCGA GGTGCCGCGC
AACGAGTGGA CGCTCGACCA GGCCGCCCGG CACGACCACC CGGCGGCCGT GCAGAAGGTG
CTCGACATCA CCGGCGCGCG CAGCATCAAG GCGGTGATCC ACTGCCAGGG CTCGACCAGC
TTCACGATGT CGGCGGTGGC CGGACTGCTG CCGCAGGTCG ACACCATCGT CTCGAACGCG
GTGTCGCTGC ACCCGATCGT CAAGACGATC TCGCACCTCA AGTCACGCCT GGCGGTGCCG
CTGGTGGGCC TGATGACGCC CTACCTCGAC CCGCAATGGG GCGAGCACCC GACCGGCCCG
GTGCCGCGCC TGCTCAACGC CCTGGTGCAG CTGACGCACC ACGAGTGCGA CAACGGCGTC
TGCAAGTTCT CGAGCTTCAC CTACGGCACC GGCTTCCCGG TGCTGTGGCG CCACGAGAAC
CTCGACGCCG CCACGCACGA CTGGATCCGC CGCGAGTTCG GGCCGGTGCC GCTGAGCTTC
TTCCGCCAGA TGGCGCGCTG CCTCGATGCC GGCCACCTGG TGGCGGCGCA GACGCTGCCC
GGTCTTCCGG CCGACTTTGC CGTCGCCGCA CCGCGCACCA CGGCGCGGTT CGCGTTCGTG
GCCGGGGCGC TGAACAACTG CTTCCACTGG CGCTCGCAGC AGGCCAGCTT CGACTGGTTC
GAGGGCCATC GCCCGGGCCG GCAGAGCCTG CACGTGATCG AGGGCTACGG CCATCTCGAC
ATCTTCCTGG GCCAGCAGGC GGCGCGCGAC ACCTACCCGG TGCTGCTCGC GGCGCTTGAA
AAGAACTGA
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| Protein sequence | MTLHEESIPF TAGDGLALNL KRVRSRSRPP SRGPVLLVHG AGVRADIFRP PLPVTFVDAL
VAAGHDVWLE NWRASIEVPR NEWTLDQAAR HDHPAAVQKV LDITGARSIK AVIHCQGSTS
FTMSAVAGLL PQVDTIVSNA VSLHPIVKTI SHLKSRLAVP LVGLMTPYLD PQWGEHPTGP
VPRLLNALVQ LTHHECDNGV CKFSSFTYGT GFPVLWRHEN LDAATHDWIR REFGPVPLSF
FRQMARCLDA GHLVAAQTLP GLPADFAVAA PRTTARFAFV AGALNNCFHW RSQQASFDWF
EGHRPGRQSL HVIEGYGHLD IFLGQQAARD TYPVLLAALE KN
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