Gene Lcho_3149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3149 
Symbol 
ID6163321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3476445 
End bp3477443 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content73% 
IMG OID641665924 
Productalpha-L-glutamate ligase 
Protein accessionYP_001792174 
Protein GI171059825 
COG category[H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) 
TIGRFAM ID[TIGR00768] alpha-L-glutamate ligases, RimK family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCC CATCCACGCC CGGCCTGCGC GTGGCCATCA TGACCGACGA GATCGGCTGG 
CACACCCGCC AGCTGCAGCG CGCGCTGCGC GAGCGCGGTG GGGTGGGGCG CTGCATCGAT 
CTGGCCGACT GTGACATCGA TACCGACGCG GCCTGGCACG GTCTGGTCCT GCCCGGCTAC 
GGTCGCGAAC TGCCCGACGC CGTGATCGTG CGCGGCGTGG CCGGCGGCAG CTTCGAGCAG 
GTCACCAAGC GGCTGGGTGT GCTGCACGCG CTGCAGGCGC TCGGCGTGCC GGTCTACAAC 
GACGCGCGTG CCATCGAGCG TAGCGTCGAC AAGTCGATGA CCAGCCTGCT GCTGCGCGCC 
GCGCGGCTGC CGGCGCCGCC GACCTGGGCG ACCGAGTCGC TGGCGCAGGC GCGCCGCATC 
GTGATGCGCG AATCGGCCGC CGGCCACGCG GTGGTGATGA AGCCGCTGTT CGGCTCGCAG 
GGCAAGGGGC TGCGGCTGAT CGGCCAGGTC GACGGCGTGT TCCAGCCGCT CGCCGACTTC 
GCGCCCGGCG ACGGCCGGCT CGCTTACCTG CAGCGTTTCG TGCCGCCGAT CGGCGCGTCC 
GGCCAGCCCG GCCACGACTG GCGCGTGCTG GTGATCGGCG GCCGTGCGGT GGCGGCGATG 
CGGCGCGTGA GCGCGCACTG GGTCCACAAC GTCGCCCAAG GCGCACGCTG CGAGCCGGCC 
GAACTCACGC CCGCATTGGC CCGCCTGGCC GAAGCCGCCG CAGCCGCCTT GCAGATGGAC 
TACGCCGGCG TCGACCTGAT GCCTGCGGCC GGCCGCGAGA CCATCCAGGT GCTCGAAGTC 
AACGGCGTGG CCGCCTGGCG CGGGTTGCAG AAGGTGACGC CGTTCAACAT CGCGCGCGCC 
CTGGTCGACG ACCTGATCGA CCGCAAGCTG GCCACCAGCC TGGCCGCGCG GTGCGACCGA 
CAACCGGCGC CCGTCGCTGC GCCGGCCCGG CGGGCGTGA
 
Protein sequence
MAIPSTPGLR VAIMTDEIGW HTRQLQRALR ERGGVGRCID LADCDIDTDA AWHGLVLPGY 
GRELPDAVIV RGVAGGSFEQ VTKRLGVLHA LQALGVPVYN DARAIERSVD KSMTSLLLRA 
ARLPAPPTWA TESLAQARRI VMRESAAGHA VVMKPLFGSQ GKGLRLIGQV DGVFQPLADF 
APGDGRLAYL QRFVPPIGAS GQPGHDWRVL VIGGRAVAAM RRVSAHWVHN VAQGARCEPA 
ELTPALARLA EAAAAALQMD YAGVDLMPAA GRETIQVLEV NGVAAWRGLQ KVTPFNIARA 
LVDDLIDRKL ATSLAARCDR QPAPVAAPAR RA