Gene Lcho_3144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3144 
Symbol 
ID6162903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3471323 
End bp3471763 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content66% 
IMG OID641665919 
ProductDNA/pantothenate metabolism flavolike protein 
Protein accessionYP_001792169 
Protein GI171059820 
COG category[C] Energy production and conversion 
COG ID[COG1036] Archaeal flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGGCA TCTACGCGAT CAGGCTCGAA TCGCTCAAGG CCCGCTTCAA GGTCTTTCGC 
GACAAGAGCG CCAGCTCGGT GCCGGTGGGT GCGCTCTACA GCGACATCTA TCACACCGTG
ATCGTGGCAC CCGCCACCAG CAACACGGTG GCCAAGTGTG CCTACGGCTT CAGCGACAGC
CTGCCCACCA ACATGTTCGC GCAGGCCGGC AAGCTCGGCA TCCCCGGCAT CGTGTTCGCC
TGCGACACCG AGCCGGTGGT GGTGACCCGC GCCCCGCACG AGTGGGTGAC GCTCAAGCCG
CGCCGCATCG AGCTCGACAA CGTCGAGCGC CTGCGCGCCA TCGACCACTG CCGCGTGGTC
TGCTCGCCGG CCGAGCTCGA AGCCGCGCTC GATCAACGTC TGCACGAACT GGCGCTCGCG
TGGAACACAT CGTCTTCCTG A
 
Protein sequence
MLGIYAIRLE SLKARFKVFR DKSASSVPVG ALYSDIYHTV IVAPATSNTV AKCAYGFSDS 
LPTNMFAQAG KLGIPGIVFA CDTEPVVVTR APHEWVTLKP RRIELDNVER LRAIDHCRVV
CSPAELEAAL DQRLHELALA WNTSSS