Gene Lcho_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3127 
Symbol 
ID6160477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3454607 
End bp3455107 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content62% 
IMG OID641665902 
Producthypothetical protein 
Protein accessionYP_001792152 
Protein GI171059803 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGG TCTTTGTCGG TATTGACCTC GCCAAGAGCG TATTCGCCCT GCATGGTGTC 
GATGAGGTCG GCAAGCCTGC GCTGGTGCGA CCGCTGGTGC GTCGCGATCG ACTGCTGGAA
ATGGTGGCCA AACTGCCGCC GTGCACCATC GGCATGGAGG CGTGCTCCGG TGCGCATTGC
TGGGCTCGGC AGTTTGTGGC GTTCGGTCAC ACCATTCGCC TGATCGCTCC CAAGTTCGTC
ATGCCCTACC GCATAAGCGG CAAACAGCAA CTCGGACGCA TCACCAAGTC CGGGGATGCG
TACTTGCGAA CCCTGCTGAT CCTGGGCGCC CGGGCGGTGC TGGCCGCAGC GGCAAACAAG
ATAGACCGAA TCAGCCGGTG GGCGATCACG TTGGCCGAGC GACGCGGTTA CTGGAAAGCG
GTCGTGGCCA TCGCCGCCAA GAACGCGCGC ATGGCCTGGG CGATGTTGGC CAAAGGTGAG
AACTTCAAAC CGATCGCCTG A
 
Protein sequence
MTMVFVGIDL AKSVFALHGV DEVGKPALVR PLVRRDRLLE MVAKLPPCTI GMEACSGAHC 
WARQFVAFGH TIRLIAPKFV MPYRISGKQQ LGRITKSGDA YLRTLLILGA RAVLAAAANK
IDRISRWAIT LAERRGYWKA VVAIAAKNAR MAWAMLAKGE NFKPIA