Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3127 |
Symbol | |
ID | 6160477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3454607 |
End bp | 3455107 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641665902 |
Product | hypothetical protein |
Protein accession | YP_001792152 |
Protein GI | 171059803 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATGG TCTTTGTCGG TATTGACCTC GCCAAGAGCG TATTCGCCCT GCATGGTGTC GATGAGGTCG GCAAGCCTGC GCTGGTGCGA CCGCTGGTGC GTCGCGATCG ACTGCTGGAA ATGGTGGCCA AACTGCCGCC GTGCACCATC GGCATGGAGG CGTGCTCCGG TGCGCATTGC TGGGCTCGGC AGTTTGTGGC GTTCGGTCAC ACCATTCGCC TGATCGCTCC CAAGTTCGTC ATGCCCTACC GCATAAGCGG CAAACAGCAA CTCGGACGCA TCACCAAGTC CGGGGATGCG TACTTGCGAA CCCTGCTGAT CCTGGGCGCC CGGGCGGTGC TGGCCGCAGC GGCAAACAAG ATAGACCGAA TCAGCCGGTG GGCGATCACG TTGGCCGAGC GACGCGGTTA CTGGAAAGCG GTCGTGGCCA TCGCCGCCAA GAACGCGCGC ATGGCCTGGG CGATGTTGGC CAAAGGTGAG AACTTCAAAC CGATCGCCTG A
|
Protein sequence | MTMVFVGIDL AKSVFALHGV DEVGKPALVR PLVRRDRLLE MVAKLPPCTI GMEACSGAHC WARQFVAFGH TIRLIAPKFV MPYRISGKQQ LGRITKSGDA YLRTLLILGA RAVLAAAANK IDRISRWAIT LAERRGYWKA VVAIAAKNAR MAWAMLAKGE NFKPIA
|
| |