| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3119 |
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| Symbol | |
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| ID | 6164060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3449737 |
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| End bp | 3450243 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665894 |
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| Product | protein tyrosine phosphatase |
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| Protein accession | YP_001792144 |
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| Protein GI | 171059795 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0394] Protein-tyrosine-phosphatase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAC ACGTTCTCAT CCTCTGCACC CACAACTCGG CGCGCAGCGT GCTGTCCGAG
GGCATGCTCA ATCATTGGGC CGCCAAGCTG GGCCTTGACG TGCAAGCCCA CAGTGCGGGC
AGTGCGCCGA GTGGCCGCAT CAATGCGTTC GCACTCGAAG CGCTCCAGCG TGCCGGCATC
GATACCCGCG CCTACCGCAG CAAGAGCTGG GACGAGTTCA GCACCGACGG CGCGCCGCCG
CTGTCGATCG TCATCACCGT GTGCGACAGC GCGGCCGCAG AGAGCTGCCC GGTGTTCTTC
GGCGGCAGCG CGGGCCAGCC GGTCAAGGTG CATTGGGGCT ACCCCGACCC GTCCAACGCC
GAAGGCGGTG ACGAGGGCAA GCGCCGCGCC TTCGAGCTGA CGCGCCAGGC GATCGGCTAC
CGGATGCTGC AACTGCTGGC CTTGCCGCTG GCGACGATGG ACCGCGCCGC ACTGCAGGCC
GCCCTGGTCG AGATCGGCCG CAGCTGA
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| Protein sequence | MTTHVLILCT HNSARSVLSE GMLNHWAAKL GLDVQAHSAG SAPSGRINAF ALEALQRAGI
DTRAYRSKSW DEFSTDGAPP LSIVITVCDS AAAESCPVFF GGSAGQPVKV HWGYPDPSNA
EGGDEGKRRA FELTRQAIGY RMLQLLALPL ATMDRAALQA ALVEIGRS
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