| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3111 |
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| Symbol | |
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| ID | 6161368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3443114 |
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| End bp | 3443947 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641665886 |
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| Product | sulphur oxidation protein SoxZ |
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| Protein accession | YP_001792136 |
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| Protein GI | 171059787 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5501] Predicted secreted protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCAC CCTGGCACCC GACCCGCCGC GCCCTGCCGG CCACGCTGAT CGGCCTGGCC
GCAGCGGCGC GGGCCCAGCT GCCCGCCGGT GACAACCCCG AAGCCAGCCC GCGCTGGCAG
CAGGTGCGGG CCTCCTTGTT CGGCACGCGG CCCATCGCCA ATGCCAGCGC CGCGCAGCTG
GTGCTGGGCG CACCGGGCCG GGCCAGCGAC CCGGCCTTCG TGCCGATCTC GATGCGCAGC
CCGATCGCAC CCGGCGAGCC CACGGCGGTG CGGCGCCTGA CGCTGGTCAT CGACAACAAC
CCCTCGCCGA TCGCCGCCCA CATCGACCTG CCAGCCGACG GCGCGCTGCC CGACATCGAG
ACCCGCGCCC GGGTCGACGA ATACACCTTC GTGCGTGCCA TCGCAGAAAC CGCCGACGGC
CGGCTGCTGA TGGCCACGCG CTTCGTCAAG GCCTCGGGCG GCTGCTCGGC ACCACCCGGC
GGCGACGAGG CGGCGCTGCA GGCCGCGATG GGCCGCATGC TGTTTCGCGC CGGTGATCCG
GTCGTCGACG GCCAGCCGCT GACGGTGCAG TGGATGGTCA ACCACCCGAA CCATTCGGGC
ATGGCGATGG ACCAGCTCAC CCGCATGTTC ACGCCGGCGC ATTACGTGCG CACGGTGCAG
ATCTGGCAAG GCGAGCGGCT GCTGCTGAAC GCCGATGTCG ACTTCGCGCT GAGCGAGAAC
CCGACGCTGC GGTTCCGATT CACGCCACGG GGCGACGCGC CGCTGCGCGC CGAAGTGACC
GACACCCGGC AGCGCCGTTT CAGCGGCAGC ACCGCGCTGA AGGACCTGCG GTGA
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| Protein sequence | MPSPWHPTRR ALPATLIGLA AAARAQLPAG DNPEASPRWQ QVRASLFGTR PIANASAAQL
VLGAPGRASD PAFVPISMRS PIAPGEPTAV RRLTLVIDNN PSPIAAHIDL PADGALPDIE
TRARVDEYTF VRAIAETADG RLLMATRFVK ASGGCSAPPG GDEAALQAAM GRMLFRAGDP
VVDGQPLTVQ WMVNHPNHSG MAMDQLTRMF TPAHYVRTVQ IWQGERLLLN ADVDFALSEN
PTLRFRFTPR GDAPLRAEVT DTRQRRFSGS TALKDLR
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