| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3102 |
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| Symbol | |
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| ID | 6161711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3435998 |
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| End bp | 3436471 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641665877 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792127 |
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| Protein GI | 171059778 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCCGCA ACCGCCGCTG CGAACGGGGC TTCACGCTGC CCGAGCTGAT CGCGGTGATG
GTCATCATCG GCGTGCTGGC GGTGGTGGCG ATGCCGAAGT TCGACGTGGC GCTGAACCTG
CGTGCCGACA CCTACCGCGA CCAGATCGTC GCCGCGCTGC GCCACGCGCA CAGCAGTGCC
GCCAGCCACC GCCGGCTGGT CTGCGCCAGC GTCGGCAGCC ACGCCGTCAA CCTCGCCATC
GCCGCGGCCA ACCCGGCCAC GGCCTGCAGC ACCGCGCTGC CCGGCCTTGA CGGCGGCGCT
GCCGCCAGCA GCAGCGCCAG CACCAGCAGC ATCAGCCCGG CCGGCACGCT CTACTTCCAG
CCCTCGGGCC GGGTGACGAG CGACGCCGCC GGTGTCAGCG CCGGGCTCTG GCGCATCGGC
GTGAGCGGCG CCAGCGCGAT CACGCTGACC GGGGAGACCG GCCATGTCGA GTGA
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| Protein sequence | MRRNRRCERG FTLPELIAVM VIIGVLAVVA MPKFDVALNL RADTYRDQIV AALRHAHSSA
ASHRRLVCAS VGSHAVNLAI AAANPATACS TALPGLDGGA AASSSASTSS ISPAGTLYFQ
PSGRVTSDAA GVSAGLWRIG VSGASAITLT GETGHVE
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