| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3085 |
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| Symbol | |
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| ID | 6163473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3415151 |
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| End bp | 3416380 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665860 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001792110 |
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| Protein GI | 171059761 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCTC CATCAGTCGC CTATCTGCTT TCGGCCTATC CCGACTTCCA CGAGACCTTT
GTGGCCCGCG AGGTCGAGGC GATGCGGCAG TTGGGCATCA ACCTGCGCAT CTACTCGCTC
AAGCGACCCG ATCCCGGCGC CTACCTGTAC CCCGATCACG CCAGGATGGT GCGCTACCTG
CCGTTCCTGT TCGACGCCCA GGTGCTGCGC GGCGTGGCAC GCAGCGTGGT GCGCCACCCG
CTGCGCGTGG CGCGTGCGAT CGGCTGGCTG GCATCGACCT ACTGGCGGCG CCCGCTCGAG
CTGGCCAAGT CGATCGCGAT CCTGCCCAAG ACGCTCGCGA TCGCCGACGA ACTCGAAGGC
ACCGACATCG CGCTGCACGC GCACTGGGCC ACCATTCCGA CCTCGGCCGC GGTGGTGATC
CAGACCGTCA GCGGCCGGCC CTTCAGCATC ACCGCGCACG CCTGGGACAT CTACCTGCCC
AGCCGCGCCG AACTGCAGGA CAAGATCCGG CGCTGCTCGG GCCTGGTCAC CTGCACCGGC
TACAACGTCG GCTTCCTGCG CGATCTGGCC GGCCCCGGCA ACGATGACAA GGTCCACCTC
AACTACCACG GCATCGACCT CTCGAAGATC ACGCAGACCA CCCGCGTGCG CGAGTCCGGC
CAGCCGCTGA AGGTGGTGGC GGTGGGCCGG CTGGTCGAGC AGAAGGGGTT TGCCGATCTG
GTCGAGTCGG TCGGGCTGGC CAACAAGGGC GGCCGCCGGG TCGAGGTCAC GCTGATCGGC
GACGGCCCGC TCGAAGCCGA GCTCAAGCAG CTCGCGGCCA AACACGGCGT GGCCGATCGC
ATCGTGTTTG CCGGCCGCGT CGGCCATGCG CAGACCATCG CGACGATGTG CGCCGCCGAC
CTGCTGATGG CGCCCAGCGT GATCGCCAGG AACGGCGACC GCGACGGCAT CCCCAACGTC
GTGCTCGAGG CGATGGCCTG CGGCCTGCCG ATCATCGGCA CCTCGGTCTC GGGCATCCCC
GAGGTGGTGC GCACCGGCGC CACCGGCGTG CTGGTGCCCC CGGGTGACGC GCCCGCGCTG
GCCCAGGCGC TGGCCACGCT GCACGACGAC CCGGCGCATG CACGCGAATG CGGCCGCCGG
TCGCGCCAGT TCATCGAAGA GAACTTCATG GCCGAGAAGA ACGTCTGCGA TCTGGCCGGC
CACCTCGGGC GCTTCCACAA CTACCGATGA
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| Protein sequence | MHPPSVAYLL SAYPDFHETF VAREVEAMRQ LGINLRIYSL KRPDPGAYLY PDHARMVRYL
PFLFDAQVLR GVARSVVRHP LRVARAIGWL ASTYWRRPLE LAKSIAILPK TLAIADELEG
TDIALHAHWA TIPTSAAVVI QTVSGRPFSI TAHAWDIYLP SRAELQDKIR RCSGLVTCTG
YNVGFLRDLA GPGNDDKVHL NYHGIDLSKI TQTTRVRESG QPLKVVAVGR LVEQKGFADL
VESVGLANKG GRRVEVTLIG DGPLEAELKQ LAAKHGVADR IVFAGRVGHA QTIATMCAAD
LLMAPSVIAR NGDRDGIPNV VLEAMACGLP IIGTSVSGIP EVVRTGATGV LVPPGDAPAL
AQALATLHDD PAHARECGRR SRQFIEENFM AEKNVCDLAG HLGRFHNYR
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