Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3080 |
Symbol | |
ID | 6160472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3410081 |
End bp | 3411199 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641665855 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001792105 |
Protein GI | 171059756 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGT TCCTGGTGAT CGACGGTTTT TATCCCTGGC CCGGTGGCAC CGAGAGCCAG GTGGCCTTGC TGGCGCGGCT GTTCAAGCGC CGCGGCCACG AGGTGCGCAT CATCGCGCCA CGCCTGGACC CGGCCAAGCC GCTCGAGGAG ATGGTCGACG GCACCCGTGT CACGCGCATC GACTACCCCA AGATCAAGGG CTTCGGTGCG GTGTTCCTGA TCCTGAAGTT CATGCTGTTC CTGCTGCGCG AGCGCAGCCA CTACGACGCC CTGCACATCC ACATGGCCAA GAACCTGGCC GCCGCTGCCG GCGCCGTGCG GCCCTGGTTG CCGGGGCCGG TGCTGGTCAA GGTGTCGGGT GCCTGGGAGT TCGAGGGCGG CGTGCTCGAC GAGCGCATGA AGAAGCATCC GGTCTATTCG ACGCTGCGCC GTCTGATGCA GCGCAACGAT GCCTTCCAGG CCATCAGCGT CGAGACCGAA CGCCGTCTGC TGGCCTCGGG CATGCCGGCG AGCAAGGTGC TGGCGATTCC GAACGCGGTC GATCTGTCGC TCTACGGCTC GCGTGAATTC GACCCGGCGC GCAAGGTTCT GCGCGTGGTC TACACCGGCC GGCTGGCGCC GGTCAAAGGC GTCGACGTGC TGCTGCGGGC CTGGAACGAG CTGCCGAACC GCGATCAGCT CGAGCTCAAC ATCGTCGGCG ACGGCCCGCA ACGCGTCGAG ATCGAGGCCT ATGTGGCGCA GCACCAGCTC GGCGCCGGCG TGCGTTTTTC GGGCTGGACC GACGACGTGC GCAGTGCGCT GCGTGATGCC GATCTGTACG TGCAGCCCTC GCTCAACGAA GGCCTGCCCA ACTCGGTGCT GGAGGCGATG GCCGCCAGCC TGCCGATCGT GGCGACCCGC GTGTCGGGCA ATGAAGATCT GGTGGTCAGC GGCGTCAACG GCTACCTGGC CGAAGCGGGC GACAGCGCCT CGCTGGCTGC TGCGCTGACA CGCGCACTGG CCGACCCCGC CGCCATGCAC CGCATGGGCC AGGCCTCGCG CCGCTTCATC GAAGACCGCT ACGGCTCCGA GCGCGTGCTC GGCCAGCTCG AAGCGGTGTA CGCCGGCTCG GCCGCTTGA
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Protein sequence | MRLFLVIDGF YPWPGGTESQ VALLARLFKR RGHEVRIIAP RLDPAKPLEE MVDGTRVTRI DYPKIKGFGA VFLILKFMLF LLRERSHYDA LHIHMAKNLA AAAGAVRPWL PGPVLVKVSG AWEFEGGVLD ERMKKHPVYS TLRRLMQRND AFQAISVETE RRLLASGMPA SKVLAIPNAV DLSLYGSREF DPARKVLRVV YTGRLAPVKG VDVLLRAWNE LPNRDQLELN IVGDGPQRVE IEAYVAQHQL GAGVRFSGWT DDVRSALRDA DLYVQPSLNE GLPNSVLEAM AASLPIVATR VSGNEDLVVS GVNGYLAEAG DSASLAAALT RALADPAAMH RMGQASRRFI EDRYGSERVL GQLEAVYAGS AA
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