| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3073 |
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| Symbol | |
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| ID | 6162636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3401631 |
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| End bp | 3403106 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641665848 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001792098 |
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| Protein GI | 171059749 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGC GCCTCGCTGT CCACGTCACC AACTACTCGT TAGGCACGTT GTTGGTCATT
GTTGCCGGAC TTGTGTCGTT CCCCATCTTC ACGCGCGCAT TCACGCTGGA GCAATACGGC
ACCCTGAGCC TCGTCTCGAC CACTTTGCTG CTCGCCACCG TGGTCGGGAA ATTTGGCATG
CAGCATTCGA TCGTGCGATT TCACGCAGAA ATGCGGGCCG GCAAATATCC GGAGACCGAG
TCCCAGTTCT TCTCGACGGT CGTTCTGGGA ATGGCTGCCG TGGGGGCCTG CGTCGCTGGA
ACCTGGCTGA TCGTGAGCCA GTTGGTGCCC GAAGCATGGT GGGGCCAAGA AGGCATTCGC
GGTCTTTTCG CACTGACTGC ACTGCTGATC GTCGTGCGGG TCATCGACAG CGCACTCGTG
AATCTGCTCA GAGCACAACA ACTCAGCGGC TGGTACAGCA TCTACAGCGT CGCCCGTCGC
TACGGGGTTC TTTTGAGCAC CTTGATTGCG GTATTTCTCC TGGTACCCGG TCTGGAAGGA
TTCTTCGGCG GGGCCATGGT TGCCGAGATC ATTGCAACAG GCATCCTCTG TTACATCCTG
CTGAAGCACC ACAATGTCTC TGCCAGCAAT GTTTCGCCGC GCCTTCTGAA GTCAATGGCT
GTATTCGGCC TGCCGATGGT TGCGTATGAA TTTGCCGGCG TCATCCTGAA CCTGGGCGAT
CGCTACGTGA TCCAGTCGAT CATGGGATCT GCTCCCCTCG GCGCCTATTC GGCGGCCTAC
AACATGTGCG AATACGTGCA GTCGATACTG GTTGCAGCGG TGGGCCAGGC CGTGACTCCG
ATGTACATGC GCCTCTGGGA AGAGCAAGGA AAAGATGCCA CTCGGGCCTT TGTCGAGCGG
GTTTTCCACT TCTACGTGCT GGCTGCATTT GCGGTCATTA CCTGCATGTG CCTGATCGGA
TCGGATCTGC TGATACTGCT TGCATCCGAA AAGTACGCCC CTGGCACCGC CATCATTCCG
GCAGTCATTG CCGGAATGGT GATCGACGGC TCTGTGCCGA TCTTGGCTGC GGGGCTGTTC
CTGGCCAAGC AGACCAAGGC GCTGATGTTG ATCGTGATCG GCAGTGCAAT CCTCAACCTG
GGATTGAATC TCTGGTGGAT TCCTGGCCAT GGCCTGCAGG GCGCAGCGAT TGCCATGCTC
GTCAGCTATG TCGCGCTGAC CGCGGGTGCT GGCTGGATCG GTTCCCGGAC CCTTGCGATC
CGTGTGCCGA TACTGAGCAT CTGCAAATTC GCTCTCTGTG GCGTCGCAGC CTACGGGATT
GCCGACTGGG GCATTCCCTC GACCGGCATG CTCGGAATCA CGGAAAAAGT TGCGCTCGGC
GGTTGCATCT ACTTTGCCTG TGTCCTGCTG ATCGACGGCC AGTGCCGCAA CATTCTGCGT
GCAGCGTTGC AGCGCTTGCG TCCCATGCCG GGTTGA
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| Protein sequence | MFKRLAVHVT NYSLGTLLVI VAGLVSFPIF TRAFTLEQYG TLSLVSTTLL LATVVGKFGM
QHSIVRFHAE MRAGKYPETE SQFFSTVVLG MAAVGACVAG TWLIVSQLVP EAWWGQEGIR
GLFALTALLI VVRVIDSALV NLLRAQQLSG WYSIYSVARR YGVLLSTLIA VFLLVPGLEG
FFGGAMVAEI IATGILCYIL LKHHNVSASN VSPRLLKSMA VFGLPMVAYE FAGVILNLGD
RYVIQSIMGS APLGAYSAAY NMCEYVQSIL VAAVGQAVTP MYMRLWEEQG KDATRAFVER
VFHFYVLAAF AVITCMCLIG SDLLILLASE KYAPGTAIIP AVIAGMVIDG SVPILAAGLF
LAKQTKALML IVIGSAILNL GLNLWWIPGH GLQGAAIAML VSYVALTAGA GWIGSRTLAI
RVPILSICKF ALCGVAAYGI ADWGIPSTGM LGITEKVALG GCIYFACVLL IDGQCRNILR
AALQRLRPMP G
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