| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3063 |
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| Symbol | |
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| ID | 6162718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3388179 |
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| End bp | 3390155 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641665838 |
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| Product | acetate--CoA ligase |
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| Protein accession | YP_001792088 |
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| Protein GI | 171059739 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.194727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAG CAGAAACCCA ATCGAAGCTG TACCTGCCCA GCGATGCCGT GGTGGCCTCT
GCCCACGTGT CGGGCATGGA TGCGTACCAC GCGCTGTGCA AGGAAGCCGA AACGGACTAC
GAGGGTTTCT GGGCCCGTCA GGCACGCGAG CTGCTGAGCT GGAAGACCCC GTTCACCACC
GTGCTCGACG AGAGCAACGC GCCGTTCTTC AAGTGGTTCG AGGACGGCAC GCTCAACGCC
TCCTACAACT GCCTGGATCG CAACATCGAG CGCGGCCTGG GCGACAAGAC TGCCATCATC
TTCGAGGCCG ACGGCGGCGA AGTCACCAAG GTCACCTACA GCGAACTGCT GGCCAAGACC
TGCCAGTACG CCAACGCGCT GAAGTCGCTG GGCGTCACCA AGGGCGATCG GGTCGTCATC
TACATCTCGA TGTCGATCGA CGGCGTGGCT GCCATGCAGG CCTGCGCCCG CATCGGCGCC
ACCCACTCGG TGGTGTTCGG CGGCTTCTCG GCGCAGTCGC TGCGTGACCG CATCGAGGAC
ACCGGCGCCG TCGCCGTGAT CACCGCCGAC CACCAGGTGC GTGGCGGCAA GCCGCTGGCG
CTCAAGGGCA TCGTCGACGA GGCGCTCGGC CTGGGCGGCT GCGATGCGGT CAAGAACGTG
CTGGTCGTCA AGCGCACCGG CTCGCCGATC AACATGGTCG AAGGCCGTGA CCTCTGGCTG
GCCGACCTGG CCGCCAGCCA GCCGACCACC TGCGAGCCCG AGTGGGTCGG CGCGGAACAC
CCGCTGTTCC TGCTCTACAC CTCCGGCTCG ACCGGCAAGC CCAAGGGCGT GCAGCACAGC
ACCGGCGGCT ACCTGCTGCA CGCCGCGCTG ACCACCCAGT GGACCTTCGA CCTGAAGGCC
GACGACGTGT TCTGGTGCAC CGCCGACATC GGCTGGGTCA CCGGCCACAC CTACATCACC
TACGGCCCGC TCGCGCTGGG CGGCACCGAG ATCGTCTTCG AAGGCGTGCC GACCTACCCG
GACGCCGGCC GCTTCTGGAA GATGATCCAG GACCACAAGG TCTCGATCTT CTACACCGCG
CCCACCGCCA TCCGCTCGCT GATCAAGGCC GCCGAGGCCA ACGACGCCGT GCACCCGAAG
AGCTACGACC TGTCGAGCCT GCGCCTGCTG GGCTCGGTCG GCGAGCCGAT CAATCCGGCC
GCCTGGGAGT GGTACTACAA GAACGTCGGT GGCAGCCGCT GCCCGATCGT CGACACCTTC
TGGCAGACCG AGACCGGCGG CCACATGATC ACCCCGCTGC CGGGCGCGAC GCCGATGGTG
CCGGGTTCGT GCACGCTGCC CTTCCCGGGC ATCCAGGCCG CGATCGTCGA CGAGACCGGC
AAGGACGTGC CCAACGGCCA GGGCGGCATC CTGGTCGTCA AGCGTCCGTG GCCGTCGATG
ATCCGCACCA TCTGGGGTGA CAACGAGCGC TTCGTCAAGA GCTACTACCC GGCCGACTTC
CAGGGCAAGT ACTACCTGGC AGGCGACGGC GCGATCCGCG ACGCCGAGAC CGGCTACTTC
ACCATCACCG GCCGCATCGA CGACGTGCTC AACGTCTCCG GCCACCGCAT GGGCACGATG
GAGATCGAGT CCGCGCTGGT CAGCTGCACC GAGCTGGTGG CCGAAGCCGC CGTGGTCGGC
CGCCCCGACG AGACCACCGG CGAGGCGGTC TGCGCCTTCG TCGTGCTCAA GCGCCCGGCG
CCCACCGGCG ACGAGGCCAA GGCGATCGCC AAGCAGCTGC GCGACCACGT CGGCAAGGAG
ATCGGCCCGA TCGCCAAGCC CAAGGACATC CGCTTCGGCG ACAACCTGCC CAAGACCCGC
TCGGGCAAGA TCATGCGTCG CCTGCTGCGC TCGATCGCCA AGGGCGAGAC CATCACCCAG
GACACCAGCA CTCTGGAAAA CCCGGCCATC CTGGACCAGC TCGGCCAGGC CTACTGA
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| Protein sequence | MSQAETQSKL YLPSDAVVAS AHVSGMDAYH ALCKEAETDY EGFWARQARE LLSWKTPFTT
VLDESNAPFF KWFEDGTLNA SYNCLDRNIE RGLGDKTAII FEADGGEVTK VTYSELLAKT
CQYANALKSL GVTKGDRVVI YISMSIDGVA AMQACARIGA THSVVFGGFS AQSLRDRIED
TGAVAVITAD HQVRGGKPLA LKGIVDEALG LGGCDAVKNV LVVKRTGSPI NMVEGRDLWL
ADLAASQPTT CEPEWVGAEH PLFLLYTSGS TGKPKGVQHS TGGYLLHAAL TTQWTFDLKA
DDVFWCTADI GWVTGHTYIT YGPLALGGTE IVFEGVPTYP DAGRFWKMIQ DHKVSIFYTA
PTAIRSLIKA AEANDAVHPK SYDLSSLRLL GSVGEPINPA AWEWYYKNVG GSRCPIVDTF
WQTETGGHMI TPLPGATPMV PGSCTLPFPG IQAAIVDETG KDVPNGQGGI LVVKRPWPSM
IRTIWGDNER FVKSYYPADF QGKYYLAGDG AIRDAETGYF TITGRIDDVL NVSGHRMGTM
EIESALVSCT ELVAEAAVVG RPDETTGEAV CAFVVLKRPA PTGDEAKAIA KQLRDHVGKE
IGPIAKPKDI RFGDNLPKTR SGKIMRRLLR SIAKGETITQ DTSTLENPAI LDQLGQAY
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