| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3024 |
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| Symbol | |
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| ID | 6160846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3343092 |
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| End bp | 3344015 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665799 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001792049 |
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| Protein GI | 171059700 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGCA ACGACATCGG CTGGTGGGGC GTGCCCCTGG CCATCATCGG CGGCGCGATC
CGCGTCGGCA CGCCGCTGCT GTGGGTGAGC CTGGGCGAGA CGGTCACCGA GAAGGCCGGC
CGCATCAACC TCGGCCTCGA AGGCACCTTG CTGATGGGCG CGATGACGGC GTTCGCGGTT
TCGATGAGCA CCGGCAACCC GTGGCTGGGC GTGATCGCAG CCGCCTTGAT GGGCATCGTG
TTTGGCGTGC TGCACGGCGT GTTGTGCAGC CTGCCGCGGG TCAACGACAC GGCGATGGGC
ATCGCCTTGA TGCTGGCCGG CTCGGGCCTG GCGTTCTGGC TCGGCAAGCC GCTGATCCAG
CCGACCGCGC CCGGTCTGCC GCCGATCGTG CTGGGCGGCT GGACCGATCA ACCGGCGCTG
AAGGCCGCGT TATCGATCAA CTCGCTGTTC GTGGTCGGCC TGGTGCTGGC GTTCATCGTG
CACTGGGCGC TAGTCCACAC CAGCTTCGGC CTGCGCCTGC GGGTGGTCGG CGACAGCGAA
AACGCTGCGC GTGCCTTCGG CCTGTCGCCC ACCGCCTACC GCGTGCTGGC CACCGCATTC
GGCGGCGCCT GCGCGGGGGT GGGCGGCTCG TCGCTGTCGC TGGTCTACCC GGGCGCGTGG
AGCGAGGCGC TGTCGAGCGG GCAGGGCGTG ATGGCGGTGG CGCTGGTGAT CTTCGCGCGC
TGGGATCCGC GCCGCTGCGT GCTCGCCGCG CTGCTGTTCG GCGGCGCCAG CGCCATCAGC
CCGGCGCTGC AGGCGATGGG TTATTCGGCC GGCTACTACC TGTTCGGCGC CTTGCCCTAT
GTGCTGACGC TGGCGCTGCT GATCGGCCTG GGCAAACCGG GGCCGAGCGA CGGCGCGCCG
GGTGAACTGT CGTTGAACCG CTGA
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| Protein sequence | MDGNDIGWWG VPLAIIGGAI RVGTPLLWVS LGETVTEKAG RINLGLEGTL LMGAMTAFAV
SMSTGNPWLG VIAAALMGIV FGVLHGVLCS LPRVNDTAMG IALMLAGSGL AFWLGKPLIQ
PTAPGLPPIV LGGWTDQPAL KAALSINSLF VVGLVLAFIV HWALVHTSFG LRLRVVGDSE
NAARAFGLSP TAYRVLATAF GGACAGVGGS SLSLVYPGAW SEALSSGQGV MAVALVIFAR
WDPRRCVLAA LLFGGASAIS PALQAMGYSA GYYLFGALPY VLTLALLIGL GKPGPSDGAP
GELSLNR
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