| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2967 |
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| Symbol | |
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| ID | 6160448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3267977 |
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| End bp | 3270835 |
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| Gene Length | 2859 bp |
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| Protein Length | 952 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641665743 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791994 |
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| Protein GI | 171059645 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGAT TCTTCCCGTC GTCCCTGACC GGCTGTGCCG CCGCGCTGCC GCTGCGCCGC
GGTGCCCGCA CGCTGGCGCT GGCCACGCTG ACGCTCACGC TGCTGGCGTG TGCGCAGAAC
CCGGGCGCCG TGCCGGCCCA GGCGGTGGCG GCGTCGTCGC CGGCGGCGGG ACCGGCGACA
CCGGTGTCCG CCGCTGCATC GGGCGCCGCA TCGGGTGCCG GCAAACCTGC CGCCGCCTCG
ACGCCGCCGT CACCGGGCCA GCCGCCGGCA TTCGCCACCG TCATCAAGGA CGCCCGCCAG
ATCGACGGCC TGTTCACGGT CTGGCAGAAG GACGAGAAAT TCTGGCTCGA GCTGGCCGAG
TCGGATTTCG ACCGGCCGCT GTTCCTGTCG CCCAAGCTCG CCAGCGGCAT CGGCGAGAGC
CGGCTGCTCG GCGGCCTGAT GGTCGGCAGC GGCGCTTGGG TGGAACTGCG GCGCATCCAC
AACCAGGTGC AGCTGATCGA GCGCAACGCC GAATACGTGG CCCGCGCCGG CACGCCCGAG
GCGCGCGCGG TGGCGGCGAG CTACTCGCCC AGCCTGATCG GCAGCACCGC CGTGGCCAGC
CAGCCGCACC CCGAGCGCAA GACCGTGCTG GTCGACGCCG GGGCGCTGCT GATGGGTGAC
ACCCTCGGCC TGGCCGGCGC GCTGCAGCGC AACTACCGGC AGGGCTACAG CTACGACGGC
CGCAACTCGG CCATCACCGG CGTGCGCAAC AAGCCCGATC TGCTAGTGCT GGAGGTGCAG
AACCACTACG CCACCGCCTC GCTGGCGCAG CCGCAGCCCG GCGCGCCGGC CGGCGCACCG
GCGCCGCGCC TGCCGGTCAC GCTGCCGGAT CCGCGCAGCC TGTTCGTCAA GCTGCACTAC
TCGCTGTCGC GCCTGCCGGA GCAGCCGATG GCGGCGCGGC CCGCCGATGC GCGCGTCGGC
CACTTCACCA CCGTCGTCAG CGACTTCAGC GACGACCTGC AGCGCAGCCC CAAGCTGCGC
CACGTCAACC GCTGGCGGCT CGAGAAGAAA GACCCGTCCG CCGCACTGTC GCCGCCGGTC
AAGCCGATCA CCTACTGGCT CGACCGCACC ATCCCGCTCA AGTACCGCGA CGCCGTCCGC
GACGGCATCC TGGCCTGGAA CGCCGCCTTC GAGCGCATCG GCTTCCAGGA CGCCATCGTC
GTCAAGGTGC AGCCCGACGA CGCCGACTTC GACACCCTCG ACGTCGGCGT CGCCTCGGTG
CGCTGGATGG TCAACGGCCC GTCCGGGATG GCGGCGATCG GGCCCAGCCA CGTCGACCCG
CGCAGCGGCG AGATCCTCGA CGCCGACATC GGCTTCGAGA GCAGCTCGCT GCGCTTCAAC
CGCCTGCTGC GCTCGCAGAT CCTGGCCGAC ACGACCGCCA CGGCCGGTTT CGACTGGGCC
CGGCTGATGC AGTCGCCCGA CGCGCGCACG CTCGATCAGG CCCAGGCCGA CACCCGGCCG
GCCCACGTCC ACACCGAACG CTGCGAGATG GCCGAGATGG GCGCGATCCA GCTCGGCTAC
GGCCTCGACG TGCTGGCCGC CCGCGACGCG CTCGACCCGG CCGGCGACGT GACCGAGGCC
TTCGTGCGCA GCTACCTCAA GAGCCTGGTG ATGCACGAGG TCGGCCACAC GCTCGGGCTG
CGGCACAACT TCCGCGCCTC GCACGCCTAT GGCGAGCGCC AGATCGCCGA CCCGGCCTAT
GGCCAGACCC GGCCGCTGAC CGGCTCGGTG ATGGACTACG CCGCGATCAA CCTGCCGGCG
CCGGGCGCGC CCACGCCGGT GCCGTTCCAG ACCGTGCTCG GCCCGTACGA CTTCTGGGCG
ATCGAATACG CCTACAAGCC CATCGAGGCT GCCGCAGAAA AGGCCGAGCT GGCGCGCATC
GCCGGGCGCA GCGCCGAGCC CGAGCTGGCG TTCGGCACCG ACGAGGACAG CTTTCTCGGC
CTCGACCCCG AGTCGCTGCA GTTCGATCTG GGCGACGACC CGGTGGCGCA CGCGCGCAAG
CGCATCGAGA TCGCGCGCGA CCTGATCCAG CGCATCGAGG CCCGGCCGCT GCAGGCCGGT
GACGCCGGCT CGGACTACCC GCGCCTGCGC CGCAGCGTGT CGTACGCGCT GCGTGACGTG
GGGGCCGCCA CCGGCGTGCT GATGCGCCAG ATCGGCGGCG TGCGCACGCT GCGCGACCAG
CCCGGCACCG GCCGCGATCC GCTGGTGCCG GTCAGCGCCG CGCAGCAGCG CGCCGCGCTC
GAGCTGATCA CCGGCGCGGT GCTGTCGCCG CAGGGCCTGA CGATCTCGCC GGCGCTGCAG
CGCCGGCTGG CGCCGGACTT CTTCGACCGC GCCGACAGCC TCGGCCATGG CGAGACCGGC
ATCGGCACCG ACTTCGTGCC CCAACAGCTG CTGTCGGGCC TGCAGCGCGC GGCGGTGGGT
CAGCTGATGA GCGACCCGCT GGCGCAGCGC CTGCTCGACA GCGAGGGCAA GGCCAGCCGC
CCCGACGACA GCCTGCAGCT GGCCGAGCTG TACCAGCGCA TCGCGTCGCA GGTCTGGGCC
GAGCTGGCGG GTGCGGGCGG CGACATCGCG CCACTGCGCC GCGAACTGCA GCGCGAACAC
GCCAACCGGC TGGTCGCGCT GCTGCTGCGC CCGGCCGGCA GCGGCCGCAG CGATGCCCGC
ACGCTGGTGG CCAGCCAGAC CCGCGAACTG CTCGCTTCGG TCAGCCGCGT GGCCGGCCAG
CGCCGCTGGA GCGAGGCCAG CCGCGCCCAC CTGCGCGACA TCGGCGTGCT GCTGCGCGAG
GCGCTGACGG CCCGGGTGGT GCGCGTTTCG GCCGGGTGA
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| Protein sequence | MSRFFPSSLT GCAAALPLRR GARTLALATL TLTLLACAQN PGAVPAQAVA ASSPAAGPAT
PVSAAASGAA SGAGKPAAAS TPPSPGQPPA FATVIKDARQ IDGLFTVWQK DEKFWLELAE
SDFDRPLFLS PKLASGIGES RLLGGLMVGS GAWVELRRIH NQVQLIERNA EYVARAGTPE
ARAVAASYSP SLIGSTAVAS QPHPERKTVL VDAGALLMGD TLGLAGALQR NYRQGYSYDG
RNSAITGVRN KPDLLVLEVQ NHYATASLAQ PQPGAPAGAP APRLPVTLPD PRSLFVKLHY
SLSRLPEQPM AARPADARVG HFTTVVSDFS DDLQRSPKLR HVNRWRLEKK DPSAALSPPV
KPITYWLDRT IPLKYRDAVR DGILAWNAAF ERIGFQDAIV VKVQPDDADF DTLDVGVASV
RWMVNGPSGM AAIGPSHVDP RSGEILDADI GFESSSLRFN RLLRSQILAD TTATAGFDWA
RLMQSPDART LDQAQADTRP AHVHTERCEM AEMGAIQLGY GLDVLAARDA LDPAGDVTEA
FVRSYLKSLV MHEVGHTLGL RHNFRASHAY GERQIADPAY GQTRPLTGSV MDYAAINLPA
PGAPTPVPFQ TVLGPYDFWA IEYAYKPIEA AAEKAELARI AGRSAEPELA FGTDEDSFLG
LDPESLQFDL GDDPVAHARK RIEIARDLIQ RIEARPLQAG DAGSDYPRLR RSVSYALRDV
GAATGVLMRQ IGGVRTLRDQ PGTGRDPLVP VSAAQQRAAL ELITGAVLSP QGLTISPALQ
RRLAPDFFDR ADSLGHGETG IGTDFVPQQL LSGLQRAAVG QLMSDPLAQR LLDSEGKASR
PDDSLQLAEL YQRIASQVWA ELAGAGGDIA PLRRELQREH ANRLVALLLR PAGSGRSDAR
TLVASQTREL LASVSRVAGQ RRWSEASRAH LRDIGVLLRE ALTARVVRVS AG
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