| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2965 |
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| Symbol | |
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| ID | 6160403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3263989 |
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| End bp | 3265809 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665741 |
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| Product | peptidase M24 |
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| Protein accession | YP_001791992 |
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| Protein GI | 171059643 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0006] Xaa-Pro aminopeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACCC GCACCGCATC GATCCGACAA CGCCTCACCG AACTGCGCGA GGCACTCACC
CGCCACGGCC TTGGGGCGCT GCTGCTGCCC TCGGCCGACC CGCATCTGAG CGAATACCTG
CCCGAGCGCT GGCAGGGCCG GGTGCGCTAT TCGGGCTTCA CCGGCTCGAT GGGCACGCTG
GTGGTGACGA CCGAGCGGGC CGTCGTGTTT GCCGACAGCC GCTACTGGGT GCAGGCCGAG
GCCGAGCTGG CGGGCACCGG CGTGGAGCTG TTCAAGATCC CGACCGGCGC GGCCACGCAT
CACCTGAACT GGCTGGCCGA GAACCTGCCG CGCGGCGCCA CGCTGGCGGT CGACGGCGCG
GTGCTCGGGC TGGCGAGCGC CAAGGCGCTG GCCGACACGC TGGCGGCCAA GGGCATCGTG
CTGCGCACCG ATCTGGATCT GCTCGACGAG GTCTGGGCCG ACCGCCCCGC CCTGCCCACC
GCGCCGGTCT ACGAACACCG CGCGCCGCAC GCCGCCGTGA GCCGCGCGGC CAAGCTGGCC
AACGTGCGGC AGGCGATGCT GCAGCACGGC GCGAGCCACC ACTTCGTCTC GACGGTCGAC
GACATCGCCT GGATCACCAA CCTGCGCGGC GCGGACGTCG ACTACAACCC GGTGTTCCTC
GCGCACCTGC TGATCGGTGC CGAGCGCGCC ACGCTGTTCG TCGGCGCCGG CAAGGTCGAT
GGCGACGTCG CTGCGGCGCT GGCCGCCGAC AACATCACGC TCGCGCCCTA CGACGCCGCG
TCGAGCCATC TGGCGCATCT GCCGGCCCAC GCGGTGCTGC TGGTCGACCC GCGCCGCATC
ACGCTCGGCT TCCGCCAGGC GGTGCCGGCG GCGGTGAAGG TGATCGAGGC GATCAACCCG
AGCACGCTGG CCAAGAGCCG CAAGACGGCC GACGAGGCCG CCTTCATCCG CCGCGCGATG
GAGGTGGACG GCGCCGCGAT GTGCGCGTTC TACGCCTGGT TCGAGGCCGC ACTGGGCCGC
GAGGCGATCA CCGAGCTGAC GATCGACGAA CGCCTGAGCG CCGAGCGCAC CAGGCAGCCC
GATTACGTTT CGCTGAGCTT CCCGACCATC GCCGGCTTCA ACGCCAACGG CGCGATGCCG
CACTACCGCG CCACCGACGA ATCGCATGCG GTGATCTCGA CGCCACACGG CCTGGCCGCC
GAGGGCCTGC TGCTGATCGA CTCGGGCGCG CAGTACCTGG GCGGCACCAC CGACATCACG
CGGGTCTGGC CGATCGGCAT GCCGAGCGCG GCGCAGAAGG CCGACTACAC GCGGGTGCTC
AAGGGCACGC TGGCCTTGAG CCGCACGCGT TTTCCGCTCG GCACGCTGGC GCCGATGCTC
GACTCGATCG CGCGCGCGCC GCTGTGGGAG GCCGGGCTCA ACTACGGCCA CGGTACCGGC
CACGGCGTGG GCTATTTCCT CAACGTGCAT GAGGGGCCGC AGAGCATCTC GCCGGCCATC
CCCGAGCCGC AGATGGCGAT GCAGCCGGGC ATGGTGACGT CGATCGAGCC GGGCCTCTAC
CGCCCCGGGC GCTGGGGCAT CCGGATCGAG AACCTGGTGC TGAACGTGGC GTCAGCGGCG
GGCGACGAGT TCGGCGAGTT CCTCGAATTC GAGACCCTCA CGCTGTGCCC GATCGACACC
CGCTGCATCG ACTTCAGCTT GCTGCGCGAT GACGAGCGGG CTTGCCTCAA CGCCTATCAC
GCCGAGGTGC GACGCCGGCT GGCGCCGCGG GTGACGGGCG CGGCGCGCGA CTGGCTCGAA
GCGCGCACGC AGCCGATCTA G
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| Protein sequence | MDTRTASIRQ RLTELREALT RHGLGALLLP SADPHLSEYL PERWQGRVRY SGFTGSMGTL
VVTTERAVVF ADSRYWVQAE AELAGTGVEL FKIPTGAATH HLNWLAENLP RGATLAVDGA
VLGLASAKAL ADTLAAKGIV LRTDLDLLDE VWADRPALPT APVYEHRAPH AAVSRAAKLA
NVRQAMLQHG ASHHFVSTVD DIAWITNLRG ADVDYNPVFL AHLLIGAERA TLFVGAGKVD
GDVAAALAAD NITLAPYDAA SSHLAHLPAH AVLLVDPRRI TLGFRQAVPA AVKVIEAINP
STLAKSRKTA DEAAFIRRAM EVDGAAMCAF YAWFEAALGR EAITELTIDE RLSAERTRQP
DYVSLSFPTI AGFNANGAMP HYRATDESHA VISTPHGLAA EGLLLIDSGA QYLGGTTDIT
RVWPIGMPSA AQKADYTRVL KGTLALSRTR FPLGTLAPML DSIARAPLWE AGLNYGHGTG
HGVGYFLNVH EGPQSISPAI PEPQMAMQPG MVTSIEPGLY RPGRWGIRIE NLVLNVASAA
GDEFGEFLEF ETLTLCPIDT RCIDFSLLRD DERACLNAYH AEVRRRLAPR VTGAARDWLE
ARTQPI
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