Gene Lcho_2866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2866 
Symbol 
ID6159967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3154965 
End bp3155639 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID641665645 
Producthypothetical protein 
Protein accessionYP_001791896 
Protein GI171059547 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGC ATCTCGACCT CGAAGAACAG GAACAGCTCG ACCAGCTGAA GCATTTCTGG 
CGCGCCTACG GCAACCTCAT CACCTGGACG CTGGTGCTGG TGTTCGGTGC CTACGCCGCC 
TGGAACGGCT GGAACTACTG GCAGCGTGAC CAGGCCTCCA AGGCTGGCGG CATGTACGAC 
GAGGTCGAGC GCGCCGTGCT GGCCGGCGAG GCCGACCGCG CCGCCAAGGT CTTTGCCGAC 
CTGAAGGACC GTTATCCGGG CACCACGTTC GCCGAGCAGG CCGCCTTGCT GACCGCGCAG 
GTGCAGTTCG ACAAGGGCCA GATCGATGCC GCGCAGGCCA CGCTGGCCTG GGTGGCCGAC 
AAGGCCCGCG AACCCGAATA CAGCGCGGGC GCACGGCTGC GTCTGGCCGG CCTGCTGCTG 
GACGCCAAGC AATACGACGA GGCGCTGGCC CGCTTGGCCG GTGACGTGCC GCCGAGCTAC 
GAGGCCCTGG TGGCCGACCG CCGCGGCGAC ATCCTGCTCG CACAAGGCAA GAACGCCGAG 
GCCGTGGCGG CCTATCAGGT GGCGTTCAAG GGCATGGACC GCACGCTCGA TTACCGCCGC 
CTGATCGAGG CCAAGCTGAC CGCGCTGGGC GCTGCGCCGG TCGATGAAGC CGCATCGGCG 
GCTGCCAAGC CATGA
 
Protein sequence
MATHLDLEEQ EQLDQLKHFW RAYGNLITWT LVLVFGAYAA WNGWNYWQRD QASKAGGMYD 
EVERAVLAGE ADRAAKVFAD LKDRYPGTTF AEQAALLTAQ VQFDKGQIDA AQATLAWVAD 
KAREPEYSAG ARLRLAGLLL DAKQYDEALA RLAGDVPPSY EALVADRRGD ILLAQGKNAE 
AVAAYQVAFK GMDRTLDYRR LIEAKLTALG AAPVDEAASA AAKP