| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2842 |
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| Symbol | |
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| ID | 6162659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3127807 |
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| End bp | 3130119 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641665620 |
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| Product | outer membrane protein assembly complex, YaeT protein |
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| Protein accession | YP_001791872 |
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| Protein GI | 171059523 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTTTC CCGCCTCCAA CCCTCGTTTT CATCCCCTCG TCCTTGCAAT CGCGGTCAGT
GCGGCCAGCG TCAGCTTGCC GGCCTGGGCG GTCCAGCCCT TCGTGCTCAA GGACATCCGC
ATCGAAGGCC TGCAGCGCAC TGAAGCGGGC ACCGTGTTTG CCTCGCTGCC GTTCCGGGTC
GGCGACACCT ACAACGACGA CAAGGGTTCG GCGGCCTTGC GCGCGCTGTT CGCCACCGGC
CTGTTCAAGG ACGTGCGCCT CGAGGTCACC GGCCAGGTGG TGGTGGTGGT GGTCGAGGAG
CGCGCGATCA TCGCCAACGT CGACTTCACC GGCACCAAGG AGTTCGACCG CGAGACCCTC
ATCAAGGCGC TCAAGGACAT CGGCATCGGC GAAGGCCAGC CGTTCGACAA GGGCCTGGCC
GACCGCGCCG AGCAGGAGCT CAAGCGCCAG TACCTGACAC GCAGCCTCTA CGGCGCCGAG
GTCGTCACCA CCATCACGCC GGTCGAACGC AACCGCGTCA ACGTGACGTT CGCCGTCACC
GAAGGCGGCG TGGCGCGCAT CAACGAGATC CGCATCACCG GCAACCAGGC GTTCTCCGAG
AACACGCTGC TCACCGAGCT CGATCTGACG GCCGGCGGCC TGATGACCTG GTACACCAAG
AGCGATCGCT ATTCGCGCGC CAAGCTCAAT GCCGATCTCG AGACCCTGCG TGCCTGGTAC
CTCAACCGCG GCTACCTCGA GTTCGTGGTC GAGTCGACCC AGGTCGCGAT CTCGCCCGAC
AAGCAGAACA TCTCGATCAC GATCAACATC CGCGAAGGCC AGCGCTACAC CGTCACCGCG
GTCCGCCTGA GCGGCGACTA CCTCGGCAAG GACGACGAGT TCAAGTCGCT GGTGACGATC
CAGCCGGGCG AACCGTATCG CGCCGAGGCC GTCACGAACA CCCAGAAGGC CTTCACCGAT
CGTTTCGGCC TGTTCGGCTT CGCCTTCGCG CGGGTCGAGG CGGTGCCGCA GATCGACCGC
AACACCGGCC GCGTGCAGGT GCAGCTCAAC GCCGATCCGG CGCGCCGGGT CTACGTGCGG
CGCATCAACG TGTCGGGCAA TTCACGCACG CGCGACGAAG TGATCCGCCG CGAACTGCGC
CAGTTCGAAT CGGCCTGGTA CGACGGCGCG CGCATCAAGC TGTCGCGCGA CCGGATCGAC
CGGCTCGGGT ATTTCAGCGA AGTCGACATC GAGACCACCG AGGTGCCCGG CACCTTCGAC
CAGGTCGACC TGACCGTCAG CGTGAAGGAA AAACCCACCG GCAGCCTGCT GCTGGGGGCG
AGCTTCTCTA GCGCCGACAA GCTCGCCTTC AATGCCTCGG TCAAGCAGGA GAACGTGTTC
GGCTCGGGCA ACTACCTGGG CATCGAATTC AACACCAGCA AGTCGGCGCG CTCGCTGGTG
GTGTCGACGG TCGATCCCTA TTTCACCGAT GACGGCGTGT CGCGTGCCAT CGACGTGTTC
TACCGCACCA CCAAGCCGCT CAACAGCCAG GGCGAGGACT ACCAGCTCGT CACGCCGGGT
GCGGCGATCC GTTTCGGCGT GCCCTTCTCC GAGCTCGACA CGGTGTTTGT CGGCATCGGC
ATCGAGCGCA CCACCATCAA GGGTGCCAAC GCGCTGCCGG AGAACTTCTT CCGCCAGCGT
GCGCTGTTCG GTGACAGCAG CACCTCGGTT CCGCTCACGC TCGGCTGGCA GCGCGATGGC
CGCGACAGCG CACTGGTGCC CAACGATGGC CGCTATCAGC GCCTGAATCT CGAGTGGGGC
ATCGGCGGCG ACACCCGCTA CCTGCGCAGC AACTACCAGT ATCAGCAGTA CTTTCCGCTC
AGCAAGCGCT TCACGCTCGG ACTCAACGGC GAGTTCGGCA TCGGCCGCGG GCTGGGTGGG
CGTGCCTATC CGATCTACAA GAACTTCTAC GGCGGCGGCC TCGGCACGGT GCGGGCCTTC
GACCAGAACT CGCTCGGCCC GGTCGACGTG ACGGGTGCCT ACATCGGTGG AAATCGCCGG
CTCAACCTCA ACGCCGAGCT CTACGTGCCG TTCCCCGGCA CCGGCAACGA CCGCACGTTG
CGCATCTTCG GCTACACCGA TGCCGGCAAC GTCTGGCGCG AGGGTGAATC GATGGCCGAT
ACCGAGGCCA ATCCCATCCG GGTCTCGGCC GGCGTGGGCC TGTCGTGGGT CTCTCCGGTC
GGTCCCCTCA AGCTGAGCTG GGGTGTCCCT TTGCGCTATG CGCGTACGGA TAGAATTCAG
CGCTTCCAGT TCCAGATCGG TACCGCATTT TGA
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| Protein sequence | MHFPASNPRF HPLVLAIAVS AASVSLPAWA VQPFVLKDIR IEGLQRTEAG TVFASLPFRV
GDTYNDDKGS AALRALFATG LFKDVRLEVT GQVVVVVVEE RAIIANVDFT GTKEFDRETL
IKALKDIGIG EGQPFDKGLA DRAEQELKRQ YLTRSLYGAE VVTTITPVER NRVNVTFAVT
EGGVARINEI RITGNQAFSE NTLLTELDLT AGGLMTWYTK SDRYSRAKLN ADLETLRAWY
LNRGYLEFVV ESTQVAISPD KQNISITINI REGQRYTVTA VRLSGDYLGK DDEFKSLVTI
QPGEPYRAEA VTNTQKAFTD RFGLFGFAFA RVEAVPQIDR NTGRVQVQLN ADPARRVYVR
RINVSGNSRT RDEVIRRELR QFESAWYDGA RIKLSRDRID RLGYFSEVDI ETTEVPGTFD
QVDLTVSVKE KPTGSLLLGA SFSSADKLAF NASVKQENVF GSGNYLGIEF NTSKSARSLV
VSTVDPYFTD DGVSRAIDVF YRTTKPLNSQ GEDYQLVTPG AAIRFGVPFS ELDTVFVGIG
IERTTIKGAN ALPENFFRQR ALFGDSSTSV PLTLGWQRDG RDSALVPNDG RYQRLNLEWG
IGGDTRYLRS NYQYQQYFPL SKRFTLGLNG EFGIGRGLGG RAYPIYKNFY GGGLGTVRAF
DQNSLGPVDV TGAYIGGNRR LNLNAELYVP FPGTGNDRTL RIFGYTDAGN VWREGESMAD
TEANPIRVSA GVGLSWVSPV GPLKLSWGVP LRYARTDRIQ RFQFQIGTAF
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