Gene Lcho_2832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2832 
Symbol 
ID6161586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3118433 
End bp3118705 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content67% 
IMG OID641665610 
Producthypothetical protein 
Protein accessionYP_001791862 
Protein GI171059513 
COG category[S] Function unknown 
COG ID[COG4327] Predicted membrane protein 
TIGRFAM ID[TIGR03647] probable solute:sodium symporter small subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACTGGC GCAAGGTGTG TCTCTGGACC GCACTGGGCC TGTCCGGATG GCTGCTGGTG 
ACCTGGGGGG TGGTCTGGTT CGCCAGCGAT TTCAATGCCT GGACCGTTGC CGGTGCGCCC
GCCGGCTACT GGCTGGCGGC ACAGGGCGCG ATCGGGGGCT ACCTGATCAT CATCATCGTG
CACGGCCGGA TCATGGATGC GCTGGAGCGG CGCAGCCAGG CCGCAGCCGA TGTCGCACCA
GGGCGCTCAT CACCGGAGTC CTCACTTGAC TGA
 
Protein sequence
MHWRKVCLWT ALGLSGWLLV TWGVVWFASD FNAWTVAGAP AGYWLAAQGA IGGYLIIIIV 
HGRIMDALER RSQAAADVAP GRSSPESSLD