| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2808 |
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| Symbol | |
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| ID | 6161849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3092672 |
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| End bp | 3094285 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665586 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791838 |
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| Protein GI | 171059489 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCGCC TGCCGCGACT GGCCCTCTGG CTGCTGTGTG CAGCCTATGT GCTGCCGGGC
GTGTTCGGCC GTGAGCCCTG GAAGAACGCC GACGTCACCG CCGTCGGCTA CATGTTCAGC
CTGCTCAGGG GCGACGCATC CTGGCTCGAT CCGACGATTG CCGGGATCGG CAGCGACGGC
AGCCTGCTGC CCTACTGGAT CGGTGCGGCC AACATGCACC TGATGGGCGG ACTTGTCGGG
CCGGTGCTCG CCGCGCGGCT CCCGTTCGTG CTGATGCTGG TCGGCACCCT CGCGCTGGTC
TGGTATGCCA CGCTGCACCT GGCGCGGACC GAAGCCGCAC AGCCGCTGCC CTTCGCTTTC
GGCGGCGAAG CCGACCCGGT GGACTACGCA CGAGCGATCG CGGACGGCTC GGTGCTGGCG
CTCATCTCGA CGCTCGGGCT GCTTCAGCTC GGCCACGAAA CGACGCCTGA ACTGGTCCAG
CTGCTGGGTA CGGCGCTGTT CATCTACGGT CTCGCCGCAG GGCCGTATCG ATGCTGGCAG
AGCCGCCTGG GTGTGGTCGT CGCGCTGCCG ATGATGGCCG CCAGCGGCGC CGCCACGACC
GCCGTGATGC TGGCGCTGGC CGGCAGCTGG GTGTGCCTGC GCTCCAGTTC AGAGGGGCTG
CGCCGGCTGC TGCCCTGGAC GCTGGCCTCG GGCCTGCTGG CCGCGCTCAC CGCCTGGGCG
CTGGGTGGAT GGATCTGGCG CATCCCGGCC CAGTTCGACG CCTTGAGCGT CCTGCGCCTG
CTCGCCTGGT TCACCTGGCC GGTCTGGCCC CTGGCGGCGT GGACGCTCTG GCAGTGGCGC
CGCCACATCC TGCGCCGACA CCTGGCGATC CCGCTGACCA CCGGCGGTGC GGGCGTCATC
GCCAGCCTGG CGATGGGCGG CTCGGACCGC GCGCTGATGC TGGCACTGCC CGCCCTGGCG
GTGCTGGCGG CGTTTGCATT GCCGACCCTG CGACGCAGCA TGGGCGCAGC GATCGACTGG
TTTTCGGTGT TCTTCTTCAG TGCCTGCGCG ATCTCGATCT GGGTGATCTA CGCCGCCATG
CACACGCGGG TTCCGGCCAA GATCGCCGCC AACGTCTACA AGCTGGCGCC GGGCTTCGAG
GCCGTCTTCC AGCTGCCCGC GCTCGTGCTT GCCGTGCTGG GCACGTTGAT CTGGCTGGCG
CTGGTCAGGT GGCGCACCGG ACGCAATCAG CATGCGATCT GGAAGAGCCT GGTCCTGCCC
GCCGGTGGCG TGGCCCTGAA CTGGCTGCTG CTGATGACAC TCTGGCTGCC GTTGCTCGAC
TATGCCCGCA GCTATCGCCC GCTGGTGCAG CGGGTGGCGC AGCAGGTGCC GGCGGGCGCC
TGCGTCAACA CCGATGGCCT GGCGCGCGGC CAGCTGGCGG CCCTGAGCGT GCATGCCGAC
CTGAAACTGG CCCCGCAGCC CGGAGATCCG GCGTGCGACT GGCTGCTGGT CGCATGGCAC
GAATCACGCC ACCGGCGATT CGTGCCGCCC GTGCGCGCCG GCTGGCGCTG GGTCGCCAAG
GCCGAGCGGC CCACCGACCG CAAAGAATCG ATCCTGATCT ATCGACGCCG CTGA
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| Protein sequence | MQRLPRLALW LLCAAYVLPG VFGREPWKNA DVTAVGYMFS LLRGDASWLD PTIAGIGSDG
SLLPYWIGAA NMHLMGGLVG PVLAARLPFV LMLVGTLALV WYATLHLART EAAQPLPFAF
GGEADPVDYA RAIADGSVLA LISTLGLLQL GHETTPELVQ LLGTALFIYG LAAGPYRCWQ
SRLGVVVALP MMAASGAATT AVMLALAGSW VCLRSSSEGL RRLLPWTLAS GLLAALTAWA
LGGWIWRIPA QFDALSVLRL LAWFTWPVWP LAAWTLWQWR RHILRRHLAI PLTTGGAGVI
ASLAMGGSDR ALMLALPALA VLAAFALPTL RRSMGAAIDW FSVFFFSACA ISIWVIYAAM
HTRVPAKIAA NVYKLAPGFE AVFQLPALVL AVLGTLIWLA LVRWRTGRNQ HAIWKSLVLP
AGGVALNWLL LMTLWLPLLD YARSYRPLVQ RVAQQVPAGA CVNTDGLARG QLAALSVHAD
LKLAPQPGDP ACDWLLVAWH ESRHRRFVPP VRAGWRWVAK AERPTDRKES ILIYRRR
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