| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2795 |
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| Symbol | |
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| ID | 6161921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3080262 |
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| End bp | 3081041 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665573 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001791825 |
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| Protein GI | 171059476 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000141145 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGAAT CCATCCACCT CCGCCCGCTG ACGGGCAAGA ACATGCTCGT GACCGGCGTC
GCCAACGAGC AATCGATCGC CTGGGGCTGC GCCAAGGCCT TCCACGACAT GGGGGCGCGC
GTCGCCATCA CCTATCGCAA CGAACGCGAT CTGGCCGCCG TGACCCCGCT GGCCGAACAG
ATCGACGCGC TGTGCCTGCC GCTCGACGTC ACCGTCGACG GCCAGATGCA GAGCGTGTTC
GCCGAGCTCG GCCGACATTT CGGCACGCTG CACTCGGTCG TGCACTCGAT CGCCTTCGCG
CCCAAGTCCG ACCTGCACGT GCCGCTGAGC GAATGCTCGC GCGCCGGCTT CCTGAAGGCG
ATGGACTGCT CCTGCTTCAG CTTCATCGAG ATGGCCCATC TGGCCGCCCC GCTGATGACC
GAGGGCGGCA CGCTGTTCAC GATGAGCTAC CACGGCGCCC AGCGCGTGGT CGAGCACTAC
AACGTGATGG GCCCGGTGAA GGCCGCGCTC GAAGCCTCGG TGCGCTACCT GGCGCACGAA
CTGGGCCGCC AGGGCATCCG CGTGCACGCG ATCTCGCCGG GGCCGATCCG CACCCGCGCG
GCCAGCGGCA TCGCCGATTT CGACGAGCTG ATCAACGCCG CCAGCCAGCG CGCGCCGGCC
GGCACCATCG CCGGCATCGA GGACGTCGGC TACGCCACCG CGATGCTGGC CGTCGACGGC
GCACGCCTGC TCACCGGCAC GACGATCCAC GTCGACGGCG GTGCGCACAT CATGAATTGA
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| Protein sequence | MTESIHLRPL TGKNMLVTGV ANEQSIAWGC AKAFHDMGAR VAITYRNERD LAAVTPLAEQ
IDALCLPLDV TVDGQMQSVF AELGRHFGTL HSVVHSIAFA PKSDLHVPLS ECSRAGFLKA
MDCSCFSFIE MAHLAAPLMT EGGTLFTMSY HGAQRVVEHY NVMGPVKAAL EASVRYLAHE
LGRQGIRVHA ISPGPIRTRA ASGIADFDEL INAASQRAPA GTIAGIEDVG YATAMLAVDG
ARLLTGTTIH VDGGAHIMN
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