| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2794 |
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| Symbol | |
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| ID | 6162201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3078022 |
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| End bp | 3080241 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665572 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791824 |
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| Protein GI | 171059475 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000769221 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGGGCCG TGCCCGGCGC CGACTACGCC CAGGACGCGA TCGAACGCAG CGTGCTGTTC
CTCGATGCCC TGCGCCAACG CGGCAACATC TACGTCGAAC ACGTCAACGC CGGCGAGCCG
GACCTGCTGA AGTTCGAGCA CGAACTGGTG CTCGACGGGC GTGATCTGCC GCGGCCGTGC
AACTACGCCC TGCTGCACAT CCTGCAGCCG GCCGATGCGC CGCTCGATCC GCTGGCACGG
CCGGTGATGG TGGTCGATCC GCGCGCCGGC CACGGGCCGG GCATCGGCGG CTTCAAGCAC
GACTCCGAGG TGGGCATGGC CTTGCGTGCC GGCCATCCGG TGTATTTCGT GACCTTCCGC
CCGCAGCCTG AAGAAGGCCA GACGCTGCTC GACGTGGCCG TGGCCGAAGC CCGCTTCCTC
GAGACCGTGG CCGCCCGCCA CCCGCAATGC ACCGCCAAGC CGCTGGTGAT CGGCAACTGC
CAGGCGGGCT GGGCGATGGC CGGGCTGGCC GCGATGCGGC CCGAGCTTTT CGGCCCGCTG
ATCCTGGTCG GCTCGCCGCT GTCCTACTGG GCCGGTGGCG CCCAGCTCAA CCCGATGCGC
TACAGCGGCG CGATGCTGGG CGGCGCCTGG CTGGCGGCGC TGACGTCCGA CCTGGGCGCC
GACCGCTTCG ACGGCGCGCA CCTGGTCAAG AACTTCGAGA ACCTGAACCC CGCCAACAGC
CTGTGGGGCC GCTACTACAA GCTGTGGTCG CAGGTGGACA ACGAGTCGCA GCGCTTCCTC
GAGTTCGAGC GCTGGTGGGG TGGCTACTTC CGCATGAGCG GGGCCGAGAT CGAAGCCATC
GTCGAGAACC TGTTCGTCGG CAACAAGCTC GCGCGCGGCG ACGTGCAGAT CGGCGGCAAG
CGCATCGACC TGCGCAACAT CACGTCGCCG GTGGTCGTGT TCGCCTCCTG GGGCGACAAC
ATCACGCCGC CGCCGCAGGC GCTGAACTGG ATCATCGACG TGTGGGGCGA CGAACGCGCC
ATCGCCGCCG CCGGCCGGGT GATCGTCTAC GTGCTGCACG AGAGCGTCGG CCACCTCGGC
ATCTTTGTCG GCACCGACGT CGCGCGCAAG GAGCACGACC AGATCGTGAC CTCGCTGGAC
GTCATCGACA ACCTGCCGCC GGGCCTGTAC GAGATGAAGC TCGAGCTCAA GGATGGCAGC
GCCCCCGCGC CCACCGACGT GCTCGAGCCC GGCAGCTACA GCGTGCACTT CGAGCACCGC
ACGATGGACC ACCTGCGCGC CCTCAACCCG GAAGGGCGCG AGGAAGAACA GCTGTTCTCC
ACCGTGGCCA AGGTCTCCGA GATCAACACG GGGATCTACA AGACCTGGAT GCGCCCGTGG
GTGCGGCCGC TGGCCTCGCG CGCCCTGGCC GACGCGGCCA CCGACCTGCA CCCGCTGCGC
AGCCAGCGCC AGACCCTGTC CGACGCCCAC CCGGGCGCCG CGCCGCTGGC CGCCCTGGCC
GAGCAGGTGC GCGAAAACCG CCACACCCTG CCGGACGACC ACCCGGGCCG CTCGCTCGAA
CGCATCGCCT CGTCGTGGAT CGAGACCTCG CTGAACCTGT ACCGCGACCT GCGCGACCAG
TCGGTGATCC AGTTCACCCG GACGATGTTC GGGCCGATGG GCTTCGGCGC CTGGCTGCCG
CCGGAACCGC CGGACGAGCA GATCGCCGTG ACACGCGCCC AGGCCGAGCT CGAGCGCGTG
CGACACGACG TGCTCGCCCA CATCGACGAG GGCGGCTTCC CGCAGGCCGT GTGCCGCATC
GTGATGGCCG CGATGGCCAG CGGCGGCAGG CTCGAGCGCC GCAGCCTGCG CCTGGTTCAG
CGGCTGGCCG AACGTCGGCA TCCGCCGGCC GACGGCAGCG CACCGCGGCC GATCTTCAAC
TGGCACCAGG GTGTGCGCGA AGAAGCCCGC ATCAGTGCCG TGGCCCCGGT CGAAGCCTAC
GGCGCCCTGG CCCGGATGCT GCCGGACATG CCCGCGCGCG AACGGGCACT GGCGATCGGC
GCAGCGGCCG TGATGGTGGG TCAGACCACC GGCACCAACC TGGCGCTCGA ACTGATCGAT
CGGCTGATCA CGCTGCTGGG CGCCGACCCC GAGCGGGTGA TGAACCTGGC CGACCAGCTG
ACCGCGGAGG CCACGCTCGA CGCCGTGCCG GCCCCCGTCG CCGCCCCCCT GCCCGCCTGA
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| Protein sequence | MRAVPGADYA QDAIERSVLF LDALRQRGNI YVEHVNAGEP DLLKFEHELV LDGRDLPRPC
NYALLHILQP ADAPLDPLAR PVMVVDPRAG HGPGIGGFKH DSEVGMALRA GHPVYFVTFR
PQPEEGQTLL DVAVAEARFL ETVAARHPQC TAKPLVIGNC QAGWAMAGLA AMRPELFGPL
ILVGSPLSYW AGGAQLNPMR YSGAMLGGAW LAALTSDLGA DRFDGAHLVK NFENLNPANS
LWGRYYKLWS QVDNESQRFL EFERWWGGYF RMSGAEIEAI VENLFVGNKL ARGDVQIGGK
RIDLRNITSP VVVFASWGDN ITPPPQALNW IIDVWGDERA IAAAGRVIVY VLHESVGHLG
IFVGTDVARK EHDQIVTSLD VIDNLPPGLY EMKLELKDGS APAPTDVLEP GSYSVHFEHR
TMDHLRALNP EGREEEQLFS TVAKVSEINT GIYKTWMRPW VRPLASRALA DAATDLHPLR
SQRQTLSDAH PGAAPLAALA EQVRENRHTL PDDHPGRSLE RIASSWIETS LNLYRDLRDQ
SVIQFTRTMF GPMGFGAWLP PEPPDEQIAV TRAQAELERV RHDVLAHIDE GGFPQAVCRI
VMAAMASGGR LERRSLRLVQ RLAERRHPPA DGSAPRPIFN WHQGVREEAR ISAVAPVEAY
GALARMLPDM PARERALAIG AAAVMVGQTT GTNLALELID RLITLLGADP ERVMNLADQL
TAEATLDAVP APVAAPLPA
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