| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2781 |
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| Symbol | |
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| ID | 6162272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3062652 |
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| End bp | 3065069 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665558 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001791811 |
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| Protein GI | 171059462 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000811697 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTGCCC CCAATCCGCC TTCCTACAAG ATGGCCGCTC CTGCGGCTGT CGCGGCGTTG
AGCGCCACAC AGGTGGCCGC CGTCGATGCG CCGTCGTCGC TGGAGGTGTG CACGCAGTGG
ATCGAGACCG AATCAGGCGA GAGACGCGGC CGCTCGCGGC TGTTGCTGAG CGGACTGCAT
TGTGCCGCCT GCGGTGGCCT GATCGAGGAC GCGCTGCAGC GCGTCGAGGG CGTCGCGTCG
GTCGAGGTCA ACGGCGCCGC GCAGCGCGCA GTGGTGGTGT GGGATCCGGC ACGCACCCGC
ATCTCGACCC TGGTCGAGGC GGTGCGCAGG GCCGGTTACG GCGCCTTCCC GGACACCGGC
GCCGAGGCCG TCGCGCTGGC CGCACGCGAG TCCCGCCGGG CGATCTGGCG CCTGTTCGTG
GCGGCCTTCT GCATGATGCA GGTGATGATG TACGCCACCC CCGCCTATGT GGCCGAGCCC
GGCGACATGA CCGACGACAT GGTGCGCCTG TTGCGCTGGG CCAGCTGGGT GCTGAGCGTG
CCGGTGGTGC TGTTTGCCGC CTCGCCGTTC TTCAAGGGCG CCTGGCGCGC CCTGCGCGAG
CGCCGCATCG GCATGGACGT GCCGGTGGTG CTGGGCATCG TCGTCACCTT CGTGGCCAGT
TCGATCGCCA CCTTCGAGCA GGCGGCGCTG GCCGGCAGCG ACGTCTATTT CGATTCGCTG
ACGATGTTCG TGAGCTTCCT GCTCGGCGCC CGCCTGCTCG AGAGCCAGGC CCGCGCACGC
GCCGCGCAGT CGCTCGATGC CGTCATGCGG CGCCTGCCCG ATGCGGTCGA GCGTCTGGGC
GACGACGGCC AGGCCACGCT CGTCACCGCG GCCGAGCTGG CCATCGGCGA CCACATCCGG
GTGCACGTCG GCCAGGCCTT TGCCGCCGAC GGCGTGGTGC TCGAAGGCCG CACCCAGGTC
GACGAGGCCA TGCTGACCGG CGAATCGCGC CCGGTCGAGC GTGGCCCGGG CGACGAGGTG
GCTGCTGGTT GCCTCAACCT CGGCGCCCCG GTGTCGGTGC GCGTGACCCG GCTGGGCGCG
CAGACCCGCT TCCAGCGCAT CGTCGAGCTG GTCGAGCGCG CGCTCACCGG GCGGCCGTCG
TACCTGATCA GCGCCGACCG CATCGCCGGC CCGTTTCTGT GGGTGGTGCT GCTGCTGGCC
GGCGGCGCGT ATGTCGCGTG GTCGTTCATC GACCCGCACA AGGCGATCTG GGTGGCGGTG
TCGGTGCTGA TCGTCACCTG TCCCTGCGCG CTGTCGCTCG GTGCGCCGGT GGCCTGGCTG
GCTGCTGCCG GCCAGCTGGC GCGGCGCGGC ATCCTGGTGC AGCGCCTGGA TGCCCTCGAG
GCACTCACGC GGGTGCGCCA TCTGGTGTTC GACAAGACCG GCACGCTGAC CGAAGACCGC
CTCACGCTTG CCGCCGTCAG GCGGCCGTCC GCTGCGCTCG ACGGCCCCTC CACCGAGGCC
TTGCAGGCCC TGGCCGCCTC GCTGGCGGCC CAGTCGCGCC ATCCGCTGGC GCAGGCGCTG
GCACGCTCGG TCGAGCCTGC CCCGGCGGTC GCCGGGTCGG TGCCTGCCTG GCGTGACGTG
ATCGAACAGC CCGGGGCGGG TCTGCAGGCC GTTGCCGTCA CGCAGGGGCT GGACGCAACG
ACCTGGCGGT TGGGTCATGC GCTCTGGTGT GGTGTGTCGA CAACGGAGGC GGTGTCGCCG
GATCAGCCAG GGCTGATCGA GCGTCCGTCC GTCTGGCTGG CGCGTCAATC GGTCGACGGC
TGGCAGCCGA TGCTGCACGT CGAGTTCGAC GAACAGCTGC GCGCCGATGC CGAGCGCGGC
GTGGCAGCGC TCGATGCCGA AGGTCTGCAG CTGCACCTGC TGTCGGGCGA TCAGCCCGGC
AGCGTCGAGC GTCTGGCGCG TCAGTTGGGC CTTGCGCACT TCCAGGCCCG GTGCAGCCCG
CAGGACAAGC TCGAGGCGGT CGAGCGCCTG CAGCGCAGCG GCGAGCGGGT CGCGATGGTG
GGCGACGGCA TCAACGATGC GCCGGTGCTC GCGCGTGCCG ACGTCTCGAT CGCGATGGGC
AGCGCGGCCG CGCTGGCGCA GGCGCGCGCC GACGTGATCA TGTTGTCCGA CCGGATCGGC
GATCTGTCAG TTTTGCACCG GACTGCACAC CGTACGATGC GCATCGTGCG CCAGAACCTG
CGGTGGGCCT TTGCATACAA CCTGGCGTGT GTGCCGCTGG CACTGGTCGG CTGGTTGCCG
CCCTGGTTGG CCGGAATCGG CATGGCAGCG AGTTCGCTGG TCGTGGTTCT GAATGCACTG
CGGCTTGCAC GCAACACTTC AGACATGCAA TCCCAAAGCG CGGTGACCGG CCCTCGAGCG
GTCGGTGCAC CGGCCTGA
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| Protein sequence | MPAPNPPSYK MAAPAAVAAL SATQVAAVDA PSSLEVCTQW IETESGERRG RSRLLLSGLH
CAACGGLIED ALQRVEGVAS VEVNGAAQRA VVVWDPARTR ISTLVEAVRR AGYGAFPDTG
AEAVALAARE SRRAIWRLFV AAFCMMQVMM YATPAYVAEP GDMTDDMVRL LRWASWVLSV
PVVLFAASPF FKGAWRALRE RRIGMDVPVV LGIVVTFVAS SIATFEQAAL AGSDVYFDSL
TMFVSFLLGA RLLESQARAR AAQSLDAVMR RLPDAVERLG DDGQATLVTA AELAIGDHIR
VHVGQAFAAD GVVLEGRTQV DEAMLTGESR PVERGPGDEV AAGCLNLGAP VSVRVTRLGA
QTRFQRIVEL VERALTGRPS YLISADRIAG PFLWVVLLLA GGAYVAWSFI DPHKAIWVAV
SVLIVTCPCA LSLGAPVAWL AAAGQLARRG ILVQRLDALE ALTRVRHLVF DKTGTLTEDR
LTLAAVRRPS AALDGPSTEA LQALAASLAA QSRHPLAQAL ARSVEPAPAV AGSVPAWRDV
IEQPGAGLQA VAVTQGLDAT TWRLGHALWC GVSTTEAVSP DQPGLIERPS VWLARQSVDG
WQPMLHVEFD EQLRADAERG VAALDAEGLQ LHLLSGDQPG SVERLARQLG LAHFQARCSP
QDKLEAVERL QRSGERVAMV GDGINDAPVL ARADVSIAMG SAAALAQARA DVIMLSDRIG
DLSVLHRTAH RTMRIVRQNL RWAFAYNLAC VPLALVGWLP PWLAGIGMAA SSLVVVLNAL
RLARNTSDMQ SQSAVTGPRA VGAPA
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