| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2736 |
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| Symbol | |
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| ID | 6161812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3017406 |
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| End bp | 3017726 |
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| Gene Length | 321 bp |
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| Protein Length | 106 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641665513 |
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| Product | anti-sigma-28 factor, FlgM |
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| Protein accession | YP_001791766 |
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| Protein GI | 171059417 |
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| COG category | [K] Transcription
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2747] Negative regulator of flagellin synthesis (anti-sigma28 factor) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000266451 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGATCG GCCAAACCAA TGCCCCACCG GCGATCACGC CGGCCGGCAG CGCCGCAACT
TCTTCTGCAC GCGCCGCCAC CGAAGGCGCA CGCGACAGCC AGGGCCCACG TGCCGCCGCC
ACCGATGGCA GCAGCACGGT GCAACTCTCG AGCACCGCAC GCGCGCTGCT CGAGGGCGCG
GACGGCACCT TCGATGCCGA GAAGGTCGAA CGGGTGCGCC AGTCGATATC CGACGGCACC
TACAAGATCA ACCCCGACGC GATCGCCGAC AAGCTGATCG CGAACGCCCA CGAAGTGCTG
GGCAAGATCG ATCCGGCATG A
|
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| Protein sequence | MKIGQTNAPP AITPAGSAAT SSARAATEGA RDSQGPRAAA TDGSSTVQLS STARALLEGA
DGTFDAEKVE RVRQSISDGT YKINPDAIAD KLIANAHEVL GKIDPA
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