| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2723 |
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| Symbol | |
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| ID | 6160614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3004012 |
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| End bp | 3005211 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665500 |
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| Product | putative signal transduction protein |
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| Protein accession | YP_001791753 |
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| Protein GI | 171059404 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000022717 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAAAA CCATCCTCGG CCAGGTAGCC CTCAGCTACT GCCCGGTCAT CGACCGCCAA
CGCAACGTGA TGGCGACCCG CCTGACCGTC TCGCCCCTGC AGCTCGGACG GCGCATGGCC
GTCGACGAGC TGCTCGAGGC GGTCGGCCAG GTCTGGCCCG CCGATGGCCA GCGGGTGGCG
CTGTCGGTGC GCAGCGAGAC CCTGCTGTCC GACCTGCTGA CGGTGCAGCC GACCACCAAC
GTGATGATCG AAGTGCCCAA GTTCATGGCC TGCGATCCGC TGCACCGCGA TGCCATCCTG
ACGCTGGCGG CCAACGGCAA CATGCTGCTG CTGTCGGGCC GCCCCGACCA GCCGCTGCCG
CGCGAACTGC TGGGCGCCTT CAAGTACGCG ATCGTCGACA TGGCCGACGA GCGCCGCCTC
GACGCCGTGC CGGCGCCGGC GGGCATCCAG CGCTCGATCG GCTTCTTCCA GGACGGCATC
CGCAGCATGG CCGAGATGGA ATCGGCCTTC CAGCGCAATG CGGTGGCGGT GGTCGGCTGG
CCGATCGACG ATGTCATCAA GGTCAAGCCC GGACGCAGCG CGGCCACCAG CCGGCCCGAC
CTGCAGGCCA TCATCGAGCT GATCAACCAG GTCGACGCCG AAGCGCCGAT GGGCCAGCTC
GAGGCCACCC TCAAGCGCGA CCCGACGCTG GCCTACAAGC TGATGCGCTA CATCAACTCG
CCGGTGTTCG GCCTGAGCGT GGAGATCTCG TCGTTCAGCC ACGCCGTGAT GCTGCTGGGC
TACCAGCGGC TCAAGCGCTG GCTGGCGCTG CTGCTGGTGA CGGCGGGCAG CGACGCCAAC
CAGCGGCCGG TGATGTTCGC CGCCGTGCGC CGCGGCCTGC TGATGGAGGC GCTCGCGCCG
CCGGGCAGCG ACTCGACCGT CTGCAGCGAG ATGTTCATCT GCGGCGTCTT CTCGCTGCTC
GACCGCATGC TGCAGCAGCC GTTCGCCGAA CTGCTCAAGA CCATCCCGGT GCCCGACCAG
GTCTACAAGG CGCTGGTCGA GAGCAGCGGC CCGTACGAAT ACGCGATCCA CCTGGTGCGC
TGCCTCGAAG GCGGCACGGC ACACGACATC ATGGACGCGG CCGACCGCGC CCTGCTGGAG
ATGCGCACCA TCAACCGGGC CCTGCTGAAG GCCCTGGCCG GAGCGATCGA GCTGACGTGA
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| Protein sequence | MDKTILGQVA LSYCPVIDRQ RNVMATRLTV SPLQLGRRMA VDELLEAVGQ VWPADGQRVA
LSVRSETLLS DLLTVQPTTN VMIEVPKFMA CDPLHRDAIL TLAANGNMLL LSGRPDQPLP
RELLGAFKYA IVDMADERRL DAVPAPAGIQ RSIGFFQDGI RSMAEMESAF QRNAVAVVGW
PIDDVIKVKP GRSAATSRPD LQAIIELINQ VDAEAPMGQL EATLKRDPTL AYKLMRYINS
PVFGLSVEIS SFSHAVMLLG YQRLKRWLAL LLVTAGSDAN QRPVMFAAVR RGLLMEALAP
PGSDSTVCSE MFICGVFSLL DRMLQQPFAE LLKTIPVPDQ VYKALVESSG PYEYAIHLVR
CLEGGTAHDI MDAADRALLE MRTINRALLK ALAGAIELT
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