| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2707 |
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| Symbol | |
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| ID | 6162313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2977429 |
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| End bp | 2978208 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641665484 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001791737 |
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| Protein GI | 171059388 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0952006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCATA TTGCGTCCAA TACGCCGCCC AATCCTGCCG CCGATGCGGC CGGCGAGTCG
ACGCCTGCGT TCAGCCCGCT CTATCAGCAG ATCAAGGCGC TGATCATGCG TGGCCTGCAG
GGCGGCGAAT GGAAGCCCGG CGAGGCGATT CCGAGCGAGC TCGACCTGGC CGCGCGTTTC
AAGGTCAGCC AGGGCACCGT GCGCAAGGCC ATCGACGAAC TGGCGGCCGA GAACCTGCTG
GTGCGCCGGC AGGGCAAGGG CACGTTCGTC GCGACCCACA ACGAAGAGAA GATCCAGTAC
CGGTTCCTGC GGCTGCAACC CGAAGACGGC GGCCCGCCGC TGCCGATGCA GCGCGAGTTT
CTCGATTGCC GACGCCTGCG TGCGCCGGTC GACGTGGTTC GCTCGCTCGA TCTGCGCTCG
GGCGACATGG TGGTGCAGAT CCGCCGCACG CTCTCGCAGG CCGGCAGGCC GATCGTGCTC
GACGATATCT GGCTGCCCGG CAATCTGTTC AAGGGCCTGA CTGCCGAGCG CCTGAGCGAG
TATCGCGGGC CGCTCTACAG CCTGTTCGAA TCCGAATTCG GCGTGCGCAT GATTCGCGCC
GAAGAGAAGA TCCGTGCCAT CGGTGCCGAT CGTTCCGTCG CAACCTTGTT GTGCGTGAGT
GAAGGCACTC CGTTGCTGAG CGTCGAACGC CTGTCGCTGA CCTATGGCGA CAAGCCGGTC
GAGCTGCGGC GCGGCCTCTA CAACACCACG CATCATCATT ACCGCAACGA GTTGAGCTGA
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| Protein sequence | MSHIASNTPP NPAADAAGES TPAFSPLYQQ IKALIMRGLQ GGEWKPGEAI PSELDLAARF
KVSQGTVRKA IDELAAENLL VRRQGKGTFV ATHNEEKIQY RFLRLQPEDG GPPLPMQREF
LDCRRLRAPV DVVRSLDLRS GDMVVQIRRT LSQAGRPIVL DDIWLPGNLF KGLTAERLSE
YRGPLYSLFE SEFGVRMIRA EEKIRAIGAD RSVATLLCVS EGTPLLSVER LSLTYGDKPV
ELRRGLYNTT HHHYRNELS
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