Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2698 |
Symbol | |
ID | 6162376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2969235 |
End bp | 2969933 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641665475 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001791728 |
Protein GI | 171059379 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.132882 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCATA ATTATGAATT CAAGTCTGAC TCCAAAACGA CATCCGCCGT GTCATTGCCC ACCGCCGAAA CCAGTCTCTC GCCGCGCGCC CTCTACCAGG ACGTGGCCGA GCGCCTGCGC GAGCAGATCT TCAATCGCGA ACTGGAGCCG GGCAGCTGGA TCGACGAGCA GAAGCTGACG GCCGAGTTCG GCATCAGCCG CACGCCCCTG CGCGAAGCAC TGAAGGTGCT GGCGGTCGAG GGGCTGGTGA CGATGAAGGT GCGGCGCGGC GCCTATGTCA CCGAGATGTC GACGCAGGAC GTGAAGCAGG TCTATCACAT CATGGCGCTG CTCGAGGCCG ATGCCGCCGC CGAGGTGGCC ACCCACGCCA GCGAGGTCCA GCTGGCCCAG TTGCGCGCCC TGCACAACCA GCTCGAGCGC GAGGTGCAGC AGCGCGAGTT CTTCTTCGCC ACCAACGAGG CGTTCCACGC CCAGATCCAG CTGCTGGCGG GCAACCGCTG GCGGATGCAG ATCGTCAACG ACCTGCGCAA GGTCATGAAG CTCAACCGCC ACCACTCGCT GTTCAAGCAG GGCCGCATCG ACGAGTCGCT GGCCGAACAC CGCGCGCTGA TGGCGGCCAT CGAGCGGCGC GACCCCGAGG CCGCACGCTG CCTGATGCAT GCCCATTTCG AGAACGGCCT GGCCGCCGCC GCAGATTGA
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Protein sequence | MMHNYEFKSD SKTTSAVSLP TAETSLSPRA LYQDVAERLR EQIFNRELEP GSWIDEQKLT AEFGISRTPL REALKVLAVE GLVTMKVRRG AYVTEMSTQD VKQVYHIMAL LEADAAAEVA THASEVQLAQ LRALHNQLER EVQQREFFFA TNEAFHAQIQ LLAGNRWRMQ IVNDLRKVMK LNRHHSLFKQ GRIDESLAEH RALMAAIERR DPEAARCLMH AHFENGLAAA AD
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