| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2664 |
|---|
| Symbol | |
|---|
| ID | 6162010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 2924396 |
|---|
| End bp | 2925307 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641665440 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_001791694 |
|---|
| Protein GI | 171059345 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGT CGGGCGGTTG CCGCGCGTGG CTGCTGCTGA TCGGGCTGTG CCTCGGCCTC
GGCGCCGTCG CGCAGGCCGC CATCAGCGTG GCCGACGAAC GCGGCCACCG TCTGACATTC
GAGAGGCCGC CGCAGCGCAT CGTCAGCCTG ATGCCCTCGC TGACCGAAAG CGTCTGCGCG
CTCGGTGCCT GCGAGCGACT GGTCGGGGTC GACCGTTATT CCAACTGGCC CGACGCGGTG
CGCCGCCTGC CCAAGCTCGG CGGGCTGGAG GACGCGCAGA TCGAGGCCAT CGTCGCGCTG
CGGCCCGACG TCGTGCTGGC GGCGCGTTCG AGCCGCGCGA TCGAGCGGCT GGAGGCGCTG
GGCCTGAAGG TGCTGGCGCT CGAACCGGTC GACCACACCG AGCTGCGCGC CGGCCTCGCC
ACGCTGGCCA CGCTGCTCGG TCGCCCCGGC CAGGCCGAAC TGCTGTGGCA ACAGATCGAC
AGCCAGGTGC GGCGCGCCAC CGCGCAGGTG CCGCCGGCCT GGCGCGGCCA GCGGGTCTAT
TTCGAGGTCG ATGCCGCGCC CTATGCGGCC GGGGCGGTGT CCTTCGTCGG CCAGACGCTG
ACGCAGCTCG GCCTGGCCCA CATCATCGGC CCCGAACTGG GCCCGTTCCC CAAGCTCAAC
CCCGAGTTCG TGCTGCGTGC CCAACCCGAC CTCGTGATGG CGGTGACGCA CGACCTGGCC
GCGATGCCGC AGCGCCCGGG TTGGTCGCAC CTGCGGGCGC TGCAGCGCCG GCGCACCTGC
GCCTTCGCGC CCGCCGACTA CGACATGCTG GTGCGCCCCG GCCCGAGGCT GGGCGAGGGC
GCCTTGCTGA TCGCCGCCTG CCTCGGCCGG CTGGCCGCGC CCGTACCCGG CGGCAACGGA
ACATCGAAAT GA
|
|---|
| Protein sequence | MSLSGGCRAW LLLIGLCLGL GAVAQAAISV ADERGHRLTF ERPPQRIVSL MPSLTESVCA
LGACERLVGV DRYSNWPDAV RRLPKLGGLE DAQIEAIVAL RPDVVLAARS SRAIERLEAL
GLKVLALEPV DHTELRAGLA TLATLLGRPG QAELLWQQID SQVRRATAQV PPAWRGQRVY
FEVDAAPYAA GAVSFVGQTL TQLGLAHIIG PELGPFPKLN PEFVLRAQPD LVMAVTHDLA
AMPQRPGWSH LRALQRRRTC AFAPADYDML VRPGPRLGEG ALLIAACLGR LAAPVPGGNG
TSK
|
|---|
| |