Gene Lcho_2653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2653 
Symbol 
ID6162797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2915445 
End bp2915873 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content71% 
IMG OID641665429 
Producthypothetical protein 
Protein accessionYP_001791683 
Protein GI171059334 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACC TGCCCCCCAC CCCCGCCGCA ACGCCCTGCC CTTGCGGCTC GGGCCAGACC 
TTGTCGGCCT GCTGCGGCCG CTATCACGCG GGCGCGCTGC ACCTGCAGGC ACCGGACGCG
GAATCGCTGA TGCGCTCGCG CTACAGCGCC TACGTGCTCG ATCGGCTCGA CTACCTGCTC
GCCACCTGGC ATCCGGACAC GCGACCGGCC AGCCTCGCCC CCAACGAGAG CGGCCTGCGC
TGGCTCGGCC TGGACGTGCG CCACCATCGA CAACAGGATG CCGACCACGC CACGGTCGAG
TTCATCGCCC GCAGCAAGCT CGGCGGGCGC GCCCACCGGC TGCACGAGAT CAGCCGCTTC
GTGCGCGAGA ACGGCCGCTG GTATTACGTC GACGAGATGG GCGCGAACCC GCAACAGGCG
CCGCGCTGA
 
Protein sequence
MKNLPPTPAA TPCPCGSGQT LSACCGRYHA GALHLQAPDA ESLMRSRYSA YVLDRLDYLL 
ATWHPDTRPA SLAPNESGLR WLGLDVRHHR QQDADHATVE FIARSKLGGR AHRLHEISRF
VRENGRWYYV DEMGANPQQA PR