| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2646 |
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| Symbol | |
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| ID | 6161166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2906719 |
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| End bp | 2909091 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665422 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001791676 |
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| Protein GI | 171059327 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCCA TCGTTCGTCC GTCCCAGGAT CCGACCGCCA GCCTCGTTCC CCGCCGCAAC
GCCGGCCCGA TCAGCCACGC CGTGGCGATG CTGCTGCTCG GCCTGACCAG CTTGAGCGCG
CACAGCCAGA CCGGCAGCAG CCCCGGGACA CCGACGGATG GCTCGGTCGA GACCCGCGAG
GTCAAGCCGC CCGCCGAGCC CACTGCTCGC CCGCCCGCCA CCGCCCCGGC GCTCGAACGC
GTCGAGATCA TCGGCACCGC CAGCGACACC GACGTGCGGC GTGAATCTAG CGCCGCCAAG
ATCGTGATCG GCCGCGAGGA ACTCGACCGC ATGGGCGACA GCAGCGTCAG CGAGGTGCTC
AAGCGCCTGC CCGGCGTGAC GCTGGGCGGG CGACCCGGTC GCGGCGGCGC CGTGCGCATG
CGCGGGCTGG GCAGCGGCTA CACGCAGATC CTGATCAACG GCGAGCGCAT GAGCGCCGGC
CTGTCGCTCG ATGACCTGAC ACCCGAACAG CTCGAACGCA TCGAGGTGCT GCGCGCACCC
ACCGCCGAAA CCGGCGCGCA GGCGATCGCC GGCACGATCA ACATCGTGCT GCGCGAAGAG
GTGCGCAAGC GGCTCAACAA CGTCCACCTG ATCCTCACGC ACGACGACCG GCACTGGCAG
CCCTCGGCGA CGCTGAACCG CGCCAATCAG GACGGCGCCT TCAGCTACAA CCTCAACGGC
CAGATCTCGC ACGGCGACCG CGAAAGCGAA TCGCTGCGGC GCACGCTCGA AACCAGCACG
CCCGACGCCG GCGGCGCCGA AACCACCACG CTCGACCAGA CCGACACCAG CTTCAGCCGC
GACCGCCGCA ACAGCGTGCA CCTGGGCGGG CGGCTGCAAT GGCGGTTGAG CCCGACCGAC
ACGCTGGCGC TGACGCCGTT CGCGATCGTC TCCAACAACC AGGGCCACGC CAGCAGCCTG
CGCACGCAGG CGGTGCCGGG CAGCGCGCCC GACTTCGATC GCAGCAGCGG CGCATCCACC
AGCCAGTACC GGCTGGCGCG CCTGAACGGC CAGTGGCAGG GCCGCTTCGA GGGCGGCGCC
CGGCTGGAGC TGCGCGCCGG CAGCAGCGCG TGGATGTTCG ACAGCGACAG CGAGCGGCGC
GAGTTCAGCG CCGGCAGCCA GAACCGCCTT CAGCAGGATC GCTCCGAGAT CCGCGAACAG
TGGTGGAGCA CCGGCGGCAA GTACACCCGC AACCTGGCCG GCGAGCACCA GCTCGCCACC
GGCTGGGAGG CCGATTGGGG CCGCCGAGAC GACACCCGCG TCAGCCTGCA GACGCTGCCC
GGCACGGCCA CCACCTCGCT GCTGGCCGAC TTCGGCGACA ACCTGCGGGC CCACACAGTG
CGCACCGCCG TCTGGGCGCA GGACGAGTGG GATCTGAGCG GCCAGTGGGC GCTGCACGGC
GGCCTGCGCT GGGAAGGCAT CGGCACCCGC AGCGACGCGC CGGACGCGCC GGTGCGCAAC
CACAGCCAGG TGCTGAGCCC GCTGCTGCAC GCGATCTACC GCATCGAAGA GGGCGGGCGC
GACCAGATCC GCGCCAGCCT GACACGCAGC TACCGCGCGC CGACGCTGCA GAACCTGGCC
GCGCGGCCGT CGATCAACAG CACCTTCCCG GCCACCGGCG CCAATCAGCC GACCAGCCCC
GACCGCGCCG GCAACCCGGA TCTCAAGCCC GAACTGGCCA CCGGCCTGGA CGTGGCGTAC
GAGCATTACC TGGGCGGCGG CGGCGTGCTG AGCGCGGGCG TCTTCCACCG CCGCATCAAC
CAGCTGATCC GCAACCAGAC CGCGCTCGAG ACGGTCAGCT GGTCGAGCGT GCCGCGCCAC
GTGTCGCGGC CGCAGAACAT CGGCCGCGCC AGCACCAGCG GCATCGAGCT CGAAGCCAAG
CTGCGCCTCG ACGAGTGGCG CGACGGCGCC GCGCCGGTCG ACCTGCGCGG CAACCTGGCG
CTGTTCCAGT CACGGGTCGA CGGCATCGTC GGCCCCGACA ACCGGCTCGA CCAGCAGCCC
GGCTGGACCG CCAACCTCGG CGCCGACTAC CGCCTGCGCA GCTGGCCGCT GACGCTGGGC
GGCAACCTGG CGCTGACACC CGGCTATGCG GTGCAGCAGA GCAACGCCCA GCGCTTCGAA
CAGGACGCCA AACGGGTGCT CGACGCTTAC CTGCTGTGGC GCATGAGCCC GGCGACGCAG
CTGCGCTTCA CGGCCAGCAA CCTCGTGGCG CGCGACTTCC ACAACATCAG CACCGTCGTC
GGCAGCGACG GCAGCAACAC CCTGCGGCAG ACCGCGCTGA GCACCGATCC GAGCCTGACG
GTGTGGGGCC TGCGGCTCGA GATGAAGCTT TGA
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| Protein sequence | MRPIVRPSQD PTASLVPRRN AGPISHAVAM LLLGLTSLSA HSQTGSSPGT PTDGSVETRE
VKPPAEPTAR PPATAPALER VEIIGTASDT DVRRESSAAK IVIGREELDR MGDSSVSEVL
KRLPGVTLGG RPGRGGAVRM RGLGSGYTQI LINGERMSAG LSLDDLTPEQ LERIEVLRAP
TAETGAQAIA GTINIVLREE VRKRLNNVHL ILTHDDRHWQ PSATLNRANQ DGAFSYNLNG
QISHGDRESE SLRRTLETST PDAGGAETTT LDQTDTSFSR DRRNSVHLGG RLQWRLSPTD
TLALTPFAIV SNNQGHASSL RTQAVPGSAP DFDRSSGAST SQYRLARLNG QWQGRFEGGA
RLELRAGSSA WMFDSDSERR EFSAGSQNRL QQDRSEIREQ WWSTGGKYTR NLAGEHQLAT
GWEADWGRRD DTRVSLQTLP GTATTSLLAD FGDNLRAHTV RTAVWAQDEW DLSGQWALHG
GLRWEGIGTR SDAPDAPVRN HSQVLSPLLH AIYRIEEGGR DQIRASLTRS YRAPTLQNLA
ARPSINSTFP ATGANQPTSP DRAGNPDLKP ELATGLDVAY EHYLGGGGVL SAGVFHRRIN
QLIRNQTALE TVSWSSVPRH VSRPQNIGRA STSGIELEAK LRLDEWRDGA APVDLRGNLA
LFQSRVDGIV GPDNRLDQQP GWTANLGADY RLRSWPLTLG GNLALTPGYA VQQSNAQRFE
QDAKRVLDAY LLWRMSPATQ LRFTASNLVA RDFHNISTVV GSDGSNTLRQ TALSTDPSLT
VWGLRLEMKL
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