| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2637 |
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| Symbol | |
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| ID | 6160975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2898158 |
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| End bp | 2899402 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665413 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001791667 |
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| Protein GI | 171059318 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC CCCATCCCGC CCACACGCCC GCGCGGCTGT CGATGAACCA GGTGCTGCTG
TGCGGCGCGC TGATCGTCAC GCTGTCGATG GGCATCCGCC ACGGCTTCGG CCTGTGGCTC
GACCCGATCA CCAGCGAACG CGGCTGGAGC CGCGAGACCT TCGCCTTCGC GATCGCGATC
CAGAACCTGG CCTGGGGCAT CGCCGGGCCG GTGACCGGCA TGCTGGCCGA CCGCTTCGGC
GCCTTGCGCG TGCTGCTGGT GGGCAGCGTG GCCTACGCCC TCGGGCTGGT GCTGATGGCG
CTGTCGACCT CCGGCCTGGC GTTTACCGGC AGCGCCGGCC TGCTGATCGG CATGGCCCAG
TCGGGCACCA CCTACGCGGT GATCTACGGC GTGATCGGGC GCAATGTCGA CCCGTCCAAG
CGCTCGTGGG CGATGGGCGT GGCGGCGGCG GCCGGCTCGT TCGGCCAGTT CCTGATGGTG
CCGGTGGAGA GCTGGCTGAT CAACCACCTC GGCTGGCAGA ACGCGCTGTT CCTGCTGGGC
TGCGCGGCGC TGGCGATCAT GCCGCTGGCC TTCGGCCTGC GCGAGCCCAA GCTCGGACAC
GGCGCCCATC GCGGCCATCA GCAGAGCATC GCCAGCGCGG TGCGCGAGGC CTTCGGCTAC
CGCAGCTTCC AGCTGCTGAT GGCGGGTTAC TTCGTCTGCG GCTTCCAGGT CGTGTTCATC
GGCGTGCACA TGCCGAGCTA CCTGAAGGAC CACGGCATGG CGCCGCAGGT GGCCACCGGC
GCGCTGGCGC TGATCGGCCT GTTCAACGTG CTGGGCACCT ACGCGGCCGG CGTGCTCGGC
CAGCGCCTGG CCAAGCGCCA CATCCTGGCC GCCATCTACG CGCTGCGCTC GCTGGCGATC
GTGGTCTTCC TGACGGTGCC GCTCACACCC GCCAGCGTCT ACGTCTTCGC CTCGGTGATG
GGGGTGCTGT GGCTGTCGAC CATTCCGCCG ACCAACGCCG TGGTGGCGCA GATCTTCGGC
GTCCAGTACC TGTCGATGCT GGGCGGCTTC GTCTTCCTCA GCCACCAGAT CGGCTCGTTC
CTGGGCGTGT GGCTGGGCGG GCGTCTGTAC GACAGCACCG GCAGCTACGA CATCGTCTGG
TGGATCGCGG TGGCGCTGGG CATCTTTGCC GCGTTCATCA ACCTGCCGGT GCGCGAGTCC
GCGATCGCCC GGCCGGTCCA CTCGCCCTCG ACCTCCGCGG CCTGA
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| Protein sequence | MTEPHPAHTP ARLSMNQVLL CGALIVTLSM GIRHGFGLWL DPITSERGWS RETFAFAIAI
QNLAWGIAGP VTGMLADRFG ALRVLLVGSV AYALGLVLMA LSTSGLAFTG SAGLLIGMAQ
SGTTYAVIYG VIGRNVDPSK RSWAMGVAAA AGSFGQFLMV PVESWLINHL GWQNALFLLG
CAALAIMPLA FGLREPKLGH GAHRGHQQSI ASAVREAFGY RSFQLLMAGY FVCGFQVVFI
GVHMPSYLKD HGMAPQVATG ALALIGLFNV LGTYAAGVLG QRLAKRHILA AIYALRSLAI
VVFLTVPLTP ASVYVFASVM GVLWLSTIPP TNAVVAQIFG VQYLSMLGGF VFLSHQIGSF
LGVWLGGRLY DSTGSYDIVW WIAVALGIFA AFINLPVRES AIARPVHSPS TSAA
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