| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2630 |
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| Symbol | |
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| ID | 6164013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2888006 |
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| End bp | 2890483 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665406 |
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| Product | fibronectin type III domain-containing protein |
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| Protein accession | YP_001791660 |
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| Protein GI | 171059311 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCA AACTCATCGT GGCCCTGGTG GCCAGTGCAC TCGAGCTGTA TGCCGCTTCG
GTTTCGGCAC AGTCCATGAC CTGCACCCAG CCGTTCACGA CCGGCCCGCT GAACCCGGTC
AACGGTTACG CCGAAACGGT CACCGACATC AACGGCATCT CGCTGCAGAT CTGCAAGGAT
CCGGCGATGT GCTTCTTCGA CCCGGTCGTC ACGGGCAACC TGACCTCCGA GCAGGCCGGC
ACCGGCGGCG AGTCGTTCTG GTGGCTGGCG AACGCCACGC TGGCCAACAA CAGCGGCCTC
GACGCCGTGC TGGTGATGGC CGCCGAAGCG ACCTACAACA CCGAAGATCC GACCCCGGGC
GAGCAACTGA GCTTCACCCG CCTGCGCCTG CGCATCGACG CGCCGTTCAC GGGCGTCTAC
ACGGTCGAGT ACCCCTACGG CCGTGAAAGC TTCAACATCG AACTGCTGGA CGCCGGCGAC
GAGATCCGCG AAGTCTTCGA CATCTCGTTC ACCCCGAACA TGCTGTCGAA CACGCCCGCC
ACCGGCCGTG TCGGCCCGTG GCTGCGCTGG ACCGGCAACG ACGCACCGGC CGGCTTCATC
GGCGACGGCA ACACGCCGCA CGCCGTGACC GGCAGCCCTT GCGGCCAGAA CTACTTCCGC
ATCACCGCGG TCGACGTGGA CGGCACGCCG CTGCCCATCG GCGGCTTCGA TGCGCAAGGC
CAGCCGATCA ACGTGGTCGA GACGGATCTG TTCACGGTCC AGGGCCAGCT GTCGGACAAC
AAGGTCCAGA CGCCCCTGGC ATCGGATCGC ATCAGCTACG CCCGCACGGC TGGCGGCACG
CAGGTCGACG CCTTCGCGGT GTCCGGCGCC GCCACCGGCG TCGAGATGCG CGACTTCGTG
ACGACCACCG GCGTCTCCTC GCCCGTGCTG GCCGCCCCGG TCGCCCTGCA GAAGGAAACC
AACGGCAGCG CCTTCTCGAA GAGCCAGGGT CTGGTGAACG CACCGGCCAC CCTGCCGGCG
GCGATGGAAC TGCATGGCAG CGATGCCACC GGCACGACCG ACACGACCCG CCTGGTGCGC
GCGCTGACCG ACTCGGTCGT GATCAGCCAG GCCGACTACA ACCCGCTCAC CGGCAAGCTG
CTGGTTCTGG CGACCTCGAG CGACAAGGTC GCGAACCCGG CCTTGACGAT CGAGGAATTC
GGCGTCGCCA CCGGCACCGA ACTCGATGTC GGCGGCGTGC CCCCGGCCAC CGTGACGGTG
CTCTCTGCCG CAGGTGGCAA GGAGACGGTC AAGGTTCGCG TCACCGTGCC CCAGTCGGTG
ATCGCCCCCA ACGGCGTGGC CGCCAGCCTG CTCACGCCGA CCAGCGTGCA GGTCAGCTGG
ACCGATCGCT CGGACAACGA GACCGGCTTC GAAGTCGTCC GCAAGGTCGG CGCCGTCACG
ACGGTCGTCG GCACGCCTGG CGCAGCCAAC GCGGCGGGCA ACGAGCTGTC TTTCGTTGAC
ACGACCGCGC CTGACGACAC CCTCGTCAGC TACAGCGTGC GCTCGGTGCT GGGCGCCGAG
AAGGCCGAGT CGGCCTTCTC GAACGAAGTG CTGGTGCCGA TCGCGGCTCC GACGCTCAAC
AGCGTGTCCC CGGTCGCCGG CAACACGTCG ACGAACCTGC GGCTGAGCTG GACCGGTTCG
GCCAAGGCCG TGTCGTACAA CGTCTACCGC GACAACGCGC TGATCCGCAA CGTCACCGGC
CTGACGTACG ACGACATCGG ACTGACGCCC AGCACGACCT ACTCGTACCG TGTCGAAGCC
GTCGGCGCCA ACAGCAGCAC GACGTCGAAT TCGATCTCGG GCAGCACCAC GGCAGGCAGC
CTGCTGAACG CACCGACCAA CCTGGCCGTC GTGGCCGGCG TGACCGCAGC ACGTCCGCGC
GTGATCTGGG GCGATGCCTC GCAAGGCGAG ACCGGCTATC GCGTCAGCCG CGCGGCCGTG
AACGTGACAA CGCTGGTGGC AGGCACGGCC ACCGTCGCCA ACCTGGCCGC GAACACCACG
TCGTTCAGCA GCCCCGCACT GACCGCGCAG ACGCTCTACC AGTTCACGGT CAACGCCGTG
AACGGCGCCG AAGCCGGTGC GGCCGCCAGC ATCTATCACT ACCAGGGCAA TCTGCCTGTC
GCGAGAACCG TGCGCGCGAC CGTGCGCAGC ACCGGGGCAG TCGCCAACCG CACGCCGCTG
GGTCAGGTCC CGGTGACCTG GCAGGCGCCG GCCACGACCA CGGCTGGCTA CGCCAACGTG
CTGGGCTACG AGGTGCAGTA CTGCGTCGGC GCATCGACCA CCTGCACCTG GACCGGCCTG
GTGACGAAGA CGGGTGTCAC CAACGTCAAC CACACCTACA CCGGCCTGGC GAACACGCTG
CATTCGTTCC GCGTGCGCAG CATCACCGCG GCAGGTTTCG GCTCGGCCTG GAGCGTCGTC
AGCGCCACCC CGCGCTGA
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| Protein sequence | MQRKLIVALV ASALELYAAS VSAQSMTCTQ PFTTGPLNPV NGYAETVTDI NGISLQICKD
PAMCFFDPVV TGNLTSEQAG TGGESFWWLA NATLANNSGL DAVLVMAAEA TYNTEDPTPG
EQLSFTRLRL RIDAPFTGVY TVEYPYGRES FNIELLDAGD EIREVFDISF TPNMLSNTPA
TGRVGPWLRW TGNDAPAGFI GDGNTPHAVT GSPCGQNYFR ITAVDVDGTP LPIGGFDAQG
QPINVVETDL FTVQGQLSDN KVQTPLASDR ISYARTAGGT QVDAFAVSGA ATGVEMRDFV
TTTGVSSPVL AAPVALQKET NGSAFSKSQG LVNAPATLPA AMELHGSDAT GTTDTTRLVR
ALTDSVVISQ ADYNPLTGKL LVLATSSDKV ANPALTIEEF GVATGTELDV GGVPPATVTV
LSAAGGKETV KVRVTVPQSV IAPNGVAASL LTPTSVQVSW TDRSDNETGF EVVRKVGAVT
TVVGTPGAAN AAGNELSFVD TTAPDDTLVS YSVRSVLGAE KAESAFSNEV LVPIAAPTLN
SVSPVAGNTS TNLRLSWTGS AKAVSYNVYR DNALIRNVTG LTYDDIGLTP STTYSYRVEA
VGANSSTTSN SISGSTTAGS LLNAPTNLAV VAGVTAARPR VIWGDASQGE TGYRVSRAAV
NVTTLVAGTA TVANLAANTT SFSSPALTAQ TLYQFTVNAV NGAEAGAAAS IYHYQGNLPV
ARTVRATVRS TGAVANRTPL GQVPVTWQAP ATTTAGYANV LGYEVQYCVG ASTTCTWTGL
VTKTGVTNVN HTYTGLANTL HSFRVRSITA AGFGSAWSVV SATPR
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