Gene Lcho_2610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2610 
Symbol 
ID6162770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2862303 
End bp2862800 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content69% 
IMG OID641665386 
Productdisulphide bond formation protein DsbB 
Protein accessionYP_001791640 
Protein GI171059291 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1495] Disulfide bond formation protein DsbB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.443636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTGC CGTCTCGCGC GGTCTGGGCC GCGATGGGCG TGGTCAGCCT GGCGTCGGTC 
GCCATGGCGG TGTTTTCGCA GCACCGCTGG GAGATGCAAC CCTGCCCCTG GTGCATCCTG
CAGCGGCTGA TCTTCATCGG CATCGGCGTC CTGAGCCTGA TGGCAGCCTG CCTGCCGCCG
CGCGGCAACA CGCTGACCCG CCTGGCCGGC CGACTGCTGG CGGTGCTGGT GACCCTGCTG
GCGGCATCGG GCGCGGCGGC GGCGCTGTAC CAGAACCAGG TCGCCGCCAA GTCGGACTCA
TGCGACATGA CACTGGCCGA CCGCATCATC TCGGGCATCG GCGTGGATGC CCGCTGGCCG
GACATGTTCG AGGTGCGCGC ATCCTGCGCC GATGCGGCGG TGTCGCTGAT GGGCGTGCCG
TACGAGCTCT GGAGCCTGCT GCTGTTCGTC CTGATGGGCG CGCTGGCGGT GCATCGTCTG
TTCGCCCGCG ACCGCTGA
 
Protein sequence
MRLPSRAVWA AMGVVSLASV AMAVFSQHRW EMQPCPWCIL QRLIFIGIGV LSLMAACLPP 
RGNTLTRLAG RLLAVLVTLL AASGAAAALY QNQVAAKSDS CDMTLADRII SGIGVDARWP
DMFEVRASCA DAAVSLMGVP YELWSLLLFV LMGALAVHRL FARDR