| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2596 |
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| Symbol | |
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| ID | 6163509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2842477 |
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| End bp | 2843571 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665372 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_001791626 |
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| Protein GI | 171059277 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0445451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATTCG ATTCCACATT GCGTAAAGAG TTGTCACGCA GCTTCGGCGG CACGCTGATC
GTGATCCTGA CCATCGTGCT GACGATGATG CTGATCCGCA CGCTCGGCCA GGCCGCGCTC
GGCCGCGTCT CGCCGCAGGA CGTGGTGCTG CTGCTCGGCT ACACCAGCCT GGGACACCTG
CCGACGATGC TGTGCCTGTC GCTGTTCGTC GCGGTGGTCT CCACCCTGAC CCGCATGTAC
GGCGACAGCG AGATGACGAT CTGGTTCGCC AGCGGCGTGT CGCTGACACG CTTCGTGCGG
CCGGTGGTGC GCTTCGGCAC GCCGATCGTG TTCTTCGTCG CGGCCCTGCT GCTGTTCGTG
TGGCCCTGGT CGAACCGCAA TATCAGCGAA CTGCGCGGTC GCTACGAGCA ACGCTCGGAT
CTGTCGCGGG TCGCGCCGGG CCAGTTCCAG ACCTCCAGCA ACGGCCAGCG GGTCTTCTTC
ATCGACAAGC AGTCACCCGA CGCCGGCACC GGACGCAACA TCTTCATCCT CGATCAGCGT
GTCGACCGCG AGTCGGTCAC CAGCGCGCAG ACCGGCCGCA TCGACCTGCC TGACGCAGAC
GACACGCACC GCCGCCTGGT GCTCGACAAC GGCGCCCGCA CCGACCTCGA CCTGAAGGGC
GAGACCCGCA CGATCTCGCG CTTCGACCAG TACAGCATCC GCATCAGCGA GAAGGCGCTC
ACCCGCATCG ACGAGCCGCC GCCCAAGGCG CGCTCGAGCT TCGACCTGCT GCTCAGCAGC
GACCCCAAGG TGCGCGCCGA ACTGGCCTGG CGCGTCGGCA TGGTGCTGGG CGGCATCAAT
CTGATGCTGC TCGGACTGGG CCTTGCGCAA GGCGGGCCAC GCAGCGGTTC GGGCTGGACG
CTGCTGCTGG CGCTGCTGAG CTTCGTCGTC TACTTCAACC TCATCAGCCT CAGCCAGGCC
TGGGTGGCAT CGGCCAGACT GAGCCTGGGC ACGGCCCTGG CGAGCGTGCA CGGCGGCGTG
TTCGTGCTGT GCGCCGCCCT GCTGTGGTGG CGGGTGCGCG GCAAGGCCAG CTGGCGGCCG
CTGCGCCCGG CCTGA
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| Protein sequence | MLFDSTLRKE LSRSFGGTLI VILTIVLTMM LIRTLGQAAL GRVSPQDVVL LLGYTSLGHL
PTMLCLSLFV AVVSTLTRMY GDSEMTIWFA SGVSLTRFVR PVVRFGTPIV FFVAALLLFV
WPWSNRNISE LRGRYEQRSD LSRVAPGQFQ TSSNGQRVFF IDKQSPDAGT GRNIFILDQR
VDRESVTSAQ TGRIDLPDAD DTHRRLVLDN GARTDLDLKG ETRTISRFDQ YSIRISEKAL
TRIDEPPPKA RSSFDLLLSS DPKVRAELAW RVGMVLGGIN LMLLGLGLAQ GGPRSGSGWT
LLLALLSFVV YFNLISLSQA WVASARLSLG TALASVHGGV FVLCAALLWW RVRGKASWRP
LRPA
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