Gene Lcho_2595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2595 
Symbol 
ID6163563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2840989 
End bp2842449 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content69% 
IMG OID641665371 
Productleucyl aminopeptidase 
Protein accessionYP_001791625 
Protein GI171059276 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0260] Leucyl aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0344474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTTC GAGCCCTCCA GGTTGCCAAC GAGGATCTGC CCGGACAAGC CGCCGCAGCC 
TTGGTGGTCG TGTTGTCCGC CGATGCGTCT GCATGGCAAT TGCCACCGGT GTTGTCCGAT
CTTGCGCACG ACGCCGTGCG TCACGGCGAT CTCGAACTCA AGGCGGGCAA GGTTCTCTAC
ATTCATCGGC CGACGGGCCT GAAGGCATCG CGCCTGGTGC TGTCCGTCGC GGCCGATGCT
TCCGTCAAGG CCTACAAGAA GGCGGTTGCC GGGGCCTTGT CGGCAGTGAA GTCCAGCGGC
GCAGCCGGCG CCGTGCTGGC CTGGGCCGGG CCCGGTCCGC TCGGCGCCGA GCATGCGGAA
GCGGCGGTCA CCGCACTGGC CGACGCGCTC TACACCTACC GGCACAGCAA GCCGAGCGCG
CCGCCGGCGG CCGCGCTGGT CAAGCTCCAG CTGGCCTGCG ACAAGGCCGG CGCGGCGTCG
GTGCGTGCCG GCATCCTGCG TGGCAAGGCG ATTGCCGCCG GCGTGACGCT GGCGCGTGAA
GTGGCCAACC GGCCCGGCAA CCATTGCACC CCGACGATGC TGGCCGAGCA GGCCCGCATC
CTGGCGCGCG AGCAGGGCCT GAAGATCGAG GTGCTCGACC GCAAGGCGAT CGAGAAGCTC
GGCATGGGCG CGTTCCTGGC CGTCGCACAG GGCTCCGACG AGCCGCCGCA GTTCATCGTG
CTGCACTACG AAGGTGGCGC CAAGAAGGAC GCTCCGCTGG TGCTGGTGGG CAAGGGCATC
ACGTTCGACA CCGGCGGCAT CTCGATCAAG CCGGCGGCCG AGATGGACGA GATGAAGTTC
GACATGGGTG GCGCCGCCAG CGTGCTCGGC ACGATGCGCG CCGTGGCCGC GCTCAAGCCC
AAGGTCAACC TGATCGGCGT GATTCCGACC TGCGAGAACA TGCCCAGCGG CCGCGCGGTC
AAGCCGGGCG ACGTCGTCAC GAGCATGTCC GGCCAGACCA TCGAGGTGCT CAACACCGAC
GCCGAAGGCC GCCTGATCCT GTGCGATGCG CTGACCTACG TCGAGCGCTT CAAGCCTGCC
GCGGTGGTCG ACATCGCCAC GCTCACCGGC GCCTGCGTGG TCGCGCTCGG CCACCATCTG
AGCGGCCTGT TCAGTGCCGA CGATGCGCTC GCGGACGGCC TGCTCGCTGC CGGCCTGGGT
GCCCTCGATC CTGCGTGGCG CATGCCGCTG CTCGACGAAT ACGACGAGGC CCTGAAGAGC
AACTTCGCCG ACATGGGCAA CGTCGGCCCG CGTGCCGGCG GCGCCATCAC GGCGGCGATG
TTCCTCAAGC GCTACACCGC GGCCTACCGC TGGGCGCACC TCGACATCGC CGGCACCGCC
TGGAAGAGCG GCGCGGCCAA GGGATCGACC GGTCGGCCGG TGCCCTTGCT GACCCACTTC
GTGCTCTCGC ACGCAGGCTG A
 
Protein sequence
MDVRALQVAN EDLPGQAAAA LVVVLSADAS AWQLPPVLSD LAHDAVRHGD LELKAGKVLY 
IHRPTGLKAS RLVLSVAADA SVKAYKKAVA GALSAVKSSG AAGAVLAWAG PGPLGAEHAE
AAVTALADAL YTYRHSKPSA PPAAALVKLQ LACDKAGAAS VRAGILRGKA IAAGVTLARE
VANRPGNHCT PTMLAEQARI LAREQGLKIE VLDRKAIEKL GMGAFLAVAQ GSDEPPQFIV
LHYEGGAKKD APLVLVGKGI TFDTGGISIK PAAEMDEMKF DMGGAASVLG TMRAVAALKP
KVNLIGVIPT CENMPSGRAV KPGDVVTSMS GQTIEVLNTD AEGRLILCDA LTYVERFKPA
AVVDIATLTG ACVVALGHHL SGLFSADDAL ADGLLAAGLG ALDPAWRMPL LDEYDEALKS
NFADMGNVGP RAGGAITAAM FLKRYTAAYR WAHLDIAGTA WKSGAAKGST GRPVPLLTHF
VLSHAG