| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2570 |
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| Symbol | |
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| ID | 6162505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2805636 |
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| End bp | 2806304 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641665345 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001791600 |
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| Protein GI | 171059251 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000747651 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACTGC TCCTGATCGA AGACAACCTG GCGATGCAGA CCTCGCTGCA GCGCGCCTTC
GAGCGCCGCG GCATGCAGGT CGTGACCTGC GCCGACGGCG CCCGTGCGCT CGACCGCTGG
CAGGCCAGCC AGCCCGACGT GGTGCTGCTC GACCTCAGCC TGCCCGGCGT CGACGGCCTG
GAGGTGCTGA CCCGCGCCCG CGCCGAGGGC CTGCGCACGC CCGTCATCAT CCTGACCGCC
CGCGGCGCGG TGGGCGACCG CGTGCTCGGC CTGAACACCG GCGCCGACGA CTACCTGGCC
AAGCCCTTCG ACCTCGACGA ACTCGAGGCA CGCGTGAAGG CGCTGGTGCG GCGCCAGCCC
AGCGAGCGCC ACGACACGCC CGAGTACTGC GGCCTGCGTG TCGACGCGCA AAGCGGTGCG
GTCTACTTCC AGGGCCAGGC GCTCGAACTC GCGCCGCGTG AGTCGGCGCT GCTGCGCGCG
CTGCTGGCCC GGCCCGGCCA GGCGGTGGCC AAGGAACGGC TGTTCGAGCT GGTGTTCGCC
GGCGAGGCCG ACGTGCAGCC CGACGCGATC GAGGTCGTGG CCTACCGCCT GCGCAAGCGC
CTGGCGACCA CCGGCGCACG GCTGGTGACG CTGCGCGGCC TGGGTTACCT GCTGTCGCCG
CAGCCGTGA
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| Protein sequence | MKLLLIEDNL AMQTSLQRAF ERRGMQVVTC ADGARALDRW QASQPDVVLL DLSLPGVDGL
EVLTRARAEG LRTPVIILTA RGAVGDRVLG LNTGADDYLA KPFDLDELEA RVKALVRRQP
SERHDTPEYC GLRVDAQSGA VYFQGQALEL APRESALLRA LLARPGQAVA KERLFELVFA
GEADVQPDAI EVVAYRLRKR LATTGARLVT LRGLGYLLSP QP
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