| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2560 |
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| Symbol | |
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| ID | 6163160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2792237 |
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| End bp | 2794036 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641665335 |
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| Product | gamma-glutamyltransferase |
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| Protein accession | YP_001791590 |
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| Protein GI | 171059241 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0405] Gamma-glutamyltransferase |
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| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00330179 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCATCAC GCCGATGGGC CGCCACGGTG GCCGCCTGCC TTGGCCTGGC AGGCTGCATC
GGTGCACCGC CGCCACATGC CGGCGACCGG CCGGCGCAGC CCGAGGCGGC ATCCGGCCAC
GTCGAGCAAC AGGGCTGGTC GAGCACCCGC TACTCGGTGG CCGCCGCCAA CCCGCTGGCC
ACCCAGGCCG GGTACGGCGT GCTGAAAGCC GGCGGCAGCG CGGTCGACGC GGCCATCGCC
GTGCAGATGG TGCTGGGGCT GGTCGAGCCG CAGTCGAGCG GCATCGGCGG CGGCGCGTTC
CTGATGCACT GGGACGGCCG CCAGGTGCGG TCCTACGACG GCCGCGAAAC GGCACCCGCA
GGTGTCGACG ACAAGCTCTT CCTGCAAGGC GACGGCCGGC CGATGGCCTT CCATGACGCA
GCGGTCGGCG GCCGCGCGGT GGGAGTGCCC GGCACGCTGC GCATGCTTGA AATCGCTCAC
CGGGCGCACG GTCGACTGCC GTGGGCGGCG CTGTTCGAAC CGGCCATCAC GCTGGCCGAA
AGCGGCTTCC GGGTCAGCCC GCGGCTGCAC GCGCTGCTGC GAGGCGATCA GCACCTGCGC
AAGGACATCA CCGCAGCGCG TCAGTTCTAC GCCGACGATG GGCAGCCCTT GCCCGTCGGC
ACGCTGCTGC GCAACCCCGC ACTGGCGGCG GTGATGCGCA CGGTGGCCGA GCACGGCGCC
GACGCGTTCT ACGGCGGCGC CATCGCTCGC AGCATCGTCG GCAAGGTGCA GGGCCACGCA
TCCAACCCGG GCCGGCTGAG TGCGCAGGAT CTCGTCGATT ACCGCGCCCA AGTGCGCGCG
CCGCTGTGCG CCGATTGGCA GCGCTGGCGG CTGTGCGGCA TGGGGCCGCC GTCGTCGGGC
CAGATCGCGG TGATGCAGAT CCTCGGCACG CTCGACCACG TCGTGCCGAC CGCGGCCGTG
CCGTTGCAAG ACGGGATCCC GAGCGCCGAC TTCCTGCACC TGTACACCGA AGCGTCGAAG
CTGGCTTTTG CCGACCGGGC CCGGCACGTC GCCGACCCCG ATTTCGTTGC CGCCCCCGCG
GGGCGCTGGA GCAGCCTGCT CGATGCGAGC TACCTGCGCG AGCGCGCCGC GCTGATCGGA
CCGCAAACGA TGCCGACCGC CCCGCCCGGC CAACCCGGAG GGCAGCGTTC CGCCTGGGCG
GCGCAGCCGG AGCAGCCCGA ATACGGCACC TCGCACATTT CGATCGTCGA CGCGCAGGGC
CAGGCGGTGG CGATGACGAG CACCATCGAG GATCAGTTCG GAGCCCGCCA GATGGTCGAC
GGCGGCACCG GGCTGCCGGG CGGGTTCCTG CTCAACAACG AGCTGACGGA TTTCTCGTTC
GCGCCCACCG ACGCCCAGGG CCGGCCGATC GCCAACCGCG TGCAGCCCGG CAAACGGCCA
CGTTCGAGCA TGAGCCCGAC GCTGGTGTTC GACCGCGCCG GCGGCCAGCT GCAGATGAGC
GCGGGCTCGC CGGGCGGTGC GCTGATCATC CACTTCACCG CCAAGGCGCT GCTCGGCACG
CTGGCCTGGG GCCTGGACGC CCAGCAGGCC ATCGCGCTGC CCAACTTCGG CACCACCGGC
GGCCCGGTGC TGCTCGAAGC CGGGCGCTTT CCACCCGCCA CACGGAACAC CCTGAAGACG
CGCGGCCACT CGGTCATCGA ACTCGACCTG ACGAGCGGCC TGCAGGCGAT CGAACGACGT
GGCGGCGGCT GGTTCGGTGG CGCCGATCCA CGCCGCGAGG GCATCGTGAT GGGCGATTGA
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| Protein sequence | MSSRRWAATV AACLGLAGCI GAPPPHAGDR PAQPEAASGH VEQQGWSSTR YSVAAANPLA
TQAGYGVLKA GGSAVDAAIA VQMVLGLVEP QSSGIGGGAF LMHWDGRQVR SYDGRETAPA
GVDDKLFLQG DGRPMAFHDA AVGGRAVGVP GTLRMLEIAH RAHGRLPWAA LFEPAITLAE
SGFRVSPRLH ALLRGDQHLR KDITAARQFY ADDGQPLPVG TLLRNPALAA VMRTVAEHGA
DAFYGGAIAR SIVGKVQGHA SNPGRLSAQD LVDYRAQVRA PLCADWQRWR LCGMGPPSSG
QIAVMQILGT LDHVVPTAAV PLQDGIPSAD FLHLYTEASK LAFADRARHV ADPDFVAAPA
GRWSSLLDAS YLRERAALIG PQTMPTAPPG QPGGQRSAWA AQPEQPEYGT SHISIVDAQG
QAVAMTSTIE DQFGARQMVD GGTGLPGGFL LNNELTDFSF APTDAQGRPI ANRVQPGKRP
RSSMSPTLVF DRAGGQLQMS AGSPGGALII HFTAKALLGT LAWGLDAQQA IALPNFGTTG
GPVLLEAGRF PPATRNTLKT RGHSVIELDL TSGLQAIERR GGGWFGGADP RREGIVMGD
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