| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2556 |
|---|
| Symbol | |
|---|
| ID | 6163156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 2789410 |
|---|
| End bp | 2789613 |
|---|
| Gene Length | 204 bp |
|---|
| Protein Length | 67 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641665331 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001791586 |
|---|
| Protein GI | 171059237 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2835] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.00131307 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACACTC GACTGATGGA TTTGCTGGTC TGCCCTCTGT GCAAGGGGCC GCTGGCCCAC
GACCACGCCA CGCATGAACT GGTCTGCAAG GCCGACCGGC TGGCGTTTCC GATCCGTGAC
GGCATCGCCG TGATGCTCGA AAGCCAGGCT CGATCGATCG ATCAACCCGC GGCCGAATCG
GCACCCGCCG ACCTGTCGTC ATGA
|
|---|
| Protein sequence | MDTRLMDLLV CPLCKGPLAH DHATHELVCK ADRLAFPIRD GIAVMLESQA RSIDQPAAES
APADLSS
|
|---|
| |