Gene Lcho_2531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2531 
Symbol 
ID6163986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp2760784 
End bp2761401 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content72% 
IMG OID641665301 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_001791561 
Protein GI171059212 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00301608 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTGACC GGCGCGCCAT CGCGCTGCTG TCGCCGTGGC TGGCGCGGGG TGCGGCCGCG 
CTGGCGCGAG CCGGTGTGCA TGCCGACGCG GTCACGTGGT TCGGATTCGC GCTCGGCGTG 
GCCGCGGCGG GCGCGATCGC CCTGCAGGCC TGGCTGCTCG GCTGGGCGCT GATCCTGGCC 
AGCCGGCTGG CCGACGGGCT CGACGGCGCG CTGGCCCGTC ACCGCTGCGA GGCCAGCGCA 
CGCGGTGCGT TTCTCGACAT CACGCTCGAT TTCCTGTTCT ACGCGCTGGT GCCGCTGGCG 
TTCGCCTGGG CCGACCCGGT GGCCAACGCG CTGGCCGGGG CGACGTTGCT GGCCGCCTTC 
ATCGGCACCG GCAGCAGTTT CCTGGCCTAC GCCGTATTGG CCGAGCGCCA GGGGCTCAAG 
AGCCTGGTCT ATCCGCGCAA GGGCTTCTAT TACCTCGGCG GCTTGACCGA AGCCAGCGAG 
ACGCTGCTGT GCTTCAGCCT GATGTGCCTG TGGCCGGCGC TGTTCAGCGT CTGGGCCTAC 
GGGTTTGCGG TGCTGTGCCT GGCCACCATC GTGACGCGGG TGGTGGCCGG CTGGCGCCAG 
TTCGGCGGCG CCGCCTGA
 
Protein sequence
MFDRRAIALL SPWLARGAAA LARAGVHADA VTWFGFALGV AAAGAIALQA WLLGWALILA 
SRLADGLDGA LARHRCEASA RGAFLDITLD FLFYALVPLA FAWADPVANA LAGATLLAAF 
IGTGSSFLAY AVLAERQGLK SLVYPRKGFY YLGGLTEASE TLLCFSLMCL WPALFSVWAY 
GFAVLCLATI VTRVVAGWRQ FGGAA