| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2527 |
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| Symbol | |
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| ID | 6163982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2756282 |
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| End bp | 2757790 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665297 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001791557 |
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| Protein GI | 171059208 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0263323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTTG ACACCCTTGG CCTGCACGAA GCCATCCTGA AATCCGTCAC CGCCGCCGGC
TACGACACGC CGACCGACGT TCAGGCACAG ACCATTCCGC CCGCACTGCA AGGTCTCGAC
CTGCGTGTGT GCTCCAACAC CGGCAGCGGC AAGACCGCCG CCTTCGTGCT GCCGGCGCTG
CAGCGCGTGC TGGCTGCCCG CAACGACCCG TCGAAGGCCC GCGCCAAGGG CCAGGTCTGC
GGCCCGCGCG TGCTGGTGCT CGCACCGACG CGTGAACTGG CGATGCAGGT CTCCAAGGCG
GCCAGCACCT ACGGCCAGCA CGTGGCCGGC CTGCGCGTGG CCACCATCGT CGGTGGCGTG
CCCTACCCGG CCCAGCTGGC CGCGCTGCGC AAGCCGCTCG ACATCCTGAT CGCCACTCCC
GGCCGCCTGA TCGACCACCT CAACAGCGGC AAGGCCGTGC TGGGCGACGT CGAGATGCTG
ATCCTCGACG AAGCCGACCG CATGCTCGAC ATGGGCTTCA TCGAAGACAT CGAGCGCATC
GCCGAATCGC TGCCGCAAGA GCGCCAGACC GTGATGGTCA GCGCCACCTT CGCCGGTCAG
GTCGGCCGTC TGGCGGACCA GATCCTGAAG AGCGACGCCA AGCGCATCGA GATCACCAGC
CACACCGACA ACCACGAGAA CATCGAACAG CAACTGCTGT GGGCCGACAG CATCGAGCAC
AAGGCCAAGC TGCTCGAGCA CCTGCTGACC GAACGCGAAA TGCAGCAGGC GCTGGTCTTC
ACCAGCACCC AGCGTGACGC CGACGAGCTC GCCGCTCACC TGTACGAACT GGGCCACGCC
GTCGCGCCGC TGCACGGCGG CATGCCGCAA GGTCGCCGCA GCCGCACGCT GATGGCGCTG
CGCAACGGCG AGATCAAGGT CCTGATCGCC ACCGACGTCG CCGCCCGCGG CATCGACGTG
CCGACCATCA GCCACGTGAT CAATTTCGGT CTGCCGATGA AGGCCGAGGA CTACGTGCAC
CGCATCGGCC GCACCGGTCG TGCCGGCCGT ACCGGCCGCG CGATCACGCT GGCCGAGCGC
CGTGACGTCG GCATGATCCG CCGCATCCAG CAGTTCACGA CCCAGACCAT CCCGGTGACG
GTCATCGCCG GCCTGGAACC GACCCGCCCC GCGCCGGAAA TGTTCCTCAG CCGTGGTGCA
CCGCGTCGTG ATGCCGGCCG TCCGCCGCAC CGCGGTGCGG GTGGTTACGG CGCGCCGAGC
GGCCGTGGCC GTCCGGGCCC GGGCGGTTTC AACAACCGTG ACCGTGAAAG CCACGCCCCG
CGTGACGGTG GTTTCGGCGC CGCGCCGCGC AGCCATTTCA ATGGCAGCGA CGGTGGTGCC
GGTGGCCATC ACCACCCGAC TGGCGCACGT CGCCATGACG GCGATCGTAG CCCGGGCGCC
CATGGTGGCG GCCGTCCTGC CGACCGCAGT GGTTTCGGTG GCCGCCCGCG CGGTTTCACC
CCGCGCTAA
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| Protein sequence | MTFDTLGLHE AILKSVTAAG YDTPTDVQAQ TIPPALQGLD LRVCSNTGSG KTAAFVLPAL
QRVLAARNDP SKARAKGQVC GPRVLVLAPT RELAMQVSKA ASTYGQHVAG LRVATIVGGV
PYPAQLAALR KPLDILIATP GRLIDHLNSG KAVLGDVEML ILDEADRMLD MGFIEDIERI
AESLPQERQT VMVSATFAGQ VGRLADQILK SDAKRIEITS HTDNHENIEQ QLLWADSIEH
KAKLLEHLLT EREMQQALVF TSTQRDADEL AAHLYELGHA VAPLHGGMPQ GRRSRTLMAL
RNGEIKVLIA TDVAARGIDV PTISHVINFG LPMKAEDYVH RIGRTGRAGR TGRAITLAER
RDVGMIRRIQ QFTTQTIPVT VIAGLEPTRP APEMFLSRGA PRRDAGRPPH RGAGGYGAPS
GRGRPGPGGF NNRDRESHAP RDGGFGAAPR SHFNGSDGGA GGHHHPTGAR RHDGDRSPGA
HGGGRPADRS GFGGRPRGFT PR
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