| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2510 |
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| Symbol | |
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| ID | 6162518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2737168 |
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| End bp | 2739534 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665280 |
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| Product | helicase c2 |
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| Protein accession | YP_001791540 |
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| Protein GI | 171059191 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00268076 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCGCAGT ACACGGTGGC GGTGCGCACG CTGTGCGAGT TCACCGCCAA GGCCGGTGAT
CTCGACCTGC GCTTCACGCC GTCGCCCAGC GCGCAGGAGG GCATCGACGG CCACGCGCTG
GTGGCGGGGC GGCGCGGGCC GGGGCACGAG GTGGAGATCA CGCTGGCCGG CGATTTCGGG
CCGCTGCACG TGCGCGGCCG GGCCGACGGT TACGACGCTG CCCGCAACCG CCTCGAAGAA
GTCAAGACCC ACCGCGGCCG GCTCGACCGC CAGCCCGACA ACCACCGCGC GCTGCACTGG
GCGCAGGCGC AGACCTACGG CTGGCTGATG TGCCAGGCGC GCGGGCTGGC GCAGATCGAG
CTGGCGCTGG TCTACCTCGA CGTGGCCTCG CAGCAGGAGA CGGTGTTCAC GCAGCAGGTG
AGTGCCGTCG ATCTGTGCCA TCAGTTCGAG GCGCGCTGCG GCGCCTTTCT GGCCTGGGCC
GAATCCGAAC TGGCGCACCG CAGCGCGCGC GACGAGGCAC TGAGCGCGCT GGCCTTTCCG
CACGCCACCT TCCGCCACGG CCAGCGCGCG CTCGCCGAGG CGGTGTTCAA GGTCGCGCGG
GCCGGCCGCT GCCTGATGGC GCAGGCGCCC ACTGGCATCG GCAAGACGGT GGGCACGCTG
TTCCCGCTGC TCAAGGCCAT GCCCGAGCGG CTGGACCGGG TGTTTTTTTT GACCGCCAAG
ACCTCCGGCC GCGCCCTGGC ACTCGATGCG CTGGCGCTGC TGAGCGGGCG ACCGGCGTCG
ACGGCCGAGG CCGCGTCGAG CCCACCCGAG TCCGCCTTGC ACACCTTGCC CGCGCGCATC
TTCCCGCTGC GCGTGCTCGA ACTCGTCGCC CGCGACAAGG CCTGCGAGCA CCCCGACAAG
GCTTGCAACG GCGAGTCGTG CCCGCTCGCC GAAGGTTTTT ACGACCGCCT TGGCGCCGCC
CGCCACGCCG CCCTGTCGCT GCCTGACTGG CGGCGCGACA GCGTGCGCCA GCTCGCCGCC
CGGCACCACA TCTGCCCGTA CTACCTCGGC CAGGAACTGG CCCATTGGAG CGACGTGGTG
GTGGGCGACT ACAACCACTT CTTCGACAGC GCCGCCATGC TGCACGGCCT GAGCGCGCTG
CACCGGTGGC GCGTGGCGCT GCTGGTCGAC GAGGCGCACA ACCTGGTCGA GCGCGCCCGC
AAGATGTACA GCGCCGAGTT CGATCCGGCC CGGCTCAAGG CGATCAAACG TGGCGCGCCG
GCGCCGCTCA AGAAGGCCTT CGAGCGCGTG CAGCGGCGCT GGAGCGCACT CGCCGCCGAA
CACCCGCTCG ACTACCAGGT GCTCGACGCT GCGCCCGACA AGCTGCTCGA CGCACTGCAG
CAAGCCACCA CCGCCGTGTT CGATCACCTG GCCGAACACC CGATCGACGT GCAGCCGCTG
TGGCTGGATT TCTGCTTCGA CGCGCTCGCC ATCACCCGGC TGGCCGAGTC GTTCGGCGAG
CACTCGCTGT TCGATCTGGC GCGCAGCACG CAAGGCGCGC AACCCGGCGT CACGCTGTGC
CTGCGCAACG TCGTGCCGGC GCCGTTTCTC ACGCCGCGCC TGGCCGCGGC GCACAGCACC
ACGCTGTTTT CGGCCACGCT GCAGCCGCGC CGCTATCACG CCGATCTGCT CGGCCTGCCC
GACGACACCG CCTGGATCGA CGTCGATTCG CCCTTCGAGG CGCGCCAGCT CTCGGTGCAG
ATCGCCCGCC ACATCTCGAC CCGCTGGCAG CACCGCAGCG CCTCGCTGGC GCCGGTGGTC
GCGCTGATCG CGCGTCAGTA TGCCGAGCGG CCGGGCAACT ACCTGGCGTT TTTCAGCAGC
TTCGACTACC TCGAACGCGT GGCGGCGCGC TTTGCCGAGC ACCACCCCGA GGTGCCGCTG
TGGCGGCAGG CGCGCGGCAT GAGCGAGGCG GCGCAGGCGC AGTTCCTGGC GCAGTTCCGG
CCCGGCGGTT GCGGTATCGG CTTCGCGGTG CTCGGCGGCT CGTTCGCCGA AGGCATCGAC
CTGCCCGGCG AGCGCCTGGT GGGCGCTTTC ATCGCCACCC TCGGCATGCC GCAGGTCAAC
GCGGTCAACG AGCAGATCCG CCAGCGCATC GAGCGCCTGT GCGGCGCCGG TTTCGACTAC
ACCTACCTCT ACCCCGGCCT GCAGAAAGTG GTGCAGGCGG CCGGGCGCGT GATCCGCACC
ACCCGCGACC AGGGCGTGGT GCACCTGCTC GACGACCGGT TCGGCCGGCG CGAGGTGAGG
ACGCTGCTGC CGGCCTGGTG GCAGATGGAT GACGGCGTCG GCGGGTCGGA TGCCGCGTCA
AATTTGGCCC CGATGCGCAT CGGCTGA
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| Protein sequence | MAQYTVAVRT LCEFTAKAGD LDLRFTPSPS AQEGIDGHAL VAGRRGPGHE VEITLAGDFG
PLHVRGRADG YDAARNRLEE VKTHRGRLDR QPDNHRALHW AQAQTYGWLM CQARGLAQIE
LALVYLDVAS QQETVFTQQV SAVDLCHQFE ARCGAFLAWA ESELAHRSAR DEALSALAFP
HATFRHGQRA LAEAVFKVAR AGRCLMAQAP TGIGKTVGTL FPLLKAMPER LDRVFFLTAK
TSGRALALDA LALLSGRPAS TAEAASSPPE SALHTLPARI FPLRVLELVA RDKACEHPDK
ACNGESCPLA EGFYDRLGAA RHAALSLPDW RRDSVRQLAA RHHICPYYLG QELAHWSDVV
VGDYNHFFDS AAMLHGLSAL HRWRVALLVD EAHNLVERAR KMYSAEFDPA RLKAIKRGAP
APLKKAFERV QRRWSALAAE HPLDYQVLDA APDKLLDALQ QATTAVFDHL AEHPIDVQPL
WLDFCFDALA ITRLAESFGE HSLFDLARST QGAQPGVTLC LRNVVPAPFL TPRLAAAHST
TLFSATLQPR RYHADLLGLP DDTAWIDVDS PFEARQLSVQ IARHISTRWQ HRSASLAPVV
ALIARQYAER PGNYLAFFSS FDYLERVAAR FAEHHPEVPL WRQARGMSEA AQAQFLAQFR
PGGCGIGFAV LGGSFAEGID LPGERLVGAF IATLGMPQVN AVNEQIRQRI ERLCGAGFDY
TYLYPGLQKV VQAAGRVIRT TRDQGVVHLL DDRFGRREVR TLLPAWWQMD DGVGGSDAAS
NLAPMRIG
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