Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2507 |
Symbol | |
ID | 6162515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2733490 |
End bp | 2734533 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641665277 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_001791537 |
Protein GI | 171059188 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000368816 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCATTG ATTTCATACG CCAACGCCTG CGTGCCCAAG GTGCGAAACC CTGTCACGAA CAGCGGATTT TGCGGATTTG GGCGCAGGTG CTGCCGACCG AAGGTGGCCG CAGTCGCCCC GACGATTTCC TCCCGCAGGC CGTGCGCGAC GCCATGCCGG CGCTGCTGGC CGATCTGGAC GGCCTGGCCC GCCTGCGCTC GCAGCACCCC GGCGAGGACG GTTCGGCGCG CCTGCTGGTC GAACTGGCCG ATGGTCAGAC GGTCGAGAGC GTGTTGCTGC CGCGCGACGG TCTGTGCGTG TCGACCCAGG TCGGCTGCGC GGTCGGCTGC GTGTTCTGCA TGACCGGGCG CGAGGGCCTG CTGCGCCAGG TCGGCAGCGC CGAGATCGTG GCGCAGGTGG TGCTGGCGCG GCGCCAGCGG CTGGTCAAGA AGGTGGTGTT CATGGGCATG GGCGAGCCCG CGCACAACCT CGACAACGTG ATGGAGGCGA TCGACTTCCT CGGCACGACC GGCGCCATCG GCCACAAGAA CCTGGTGTTC TCGACCGTGG GCGACCCGCG CGTGTTCGAG CGCCTGCCGC TCGGGCCGGT CAAGCCGGCG CTGGCGCTGT CGCTGCACAC CACGCGGGCC GATCTGCGCG CGCAACTGCT GCCACGCGCG CCGCGCATGG ACCCGGCCGA TCTGGTCGAG CGCGCCGAAG CCTATGCACG CGCCACCAGC TACCCGATCC AGTACCAGTG GACGCTGCTC GAAGGCATCA ACGACGGGCC CGACGAGGTC GAGGGCATCG TGCGGCTGCT GCACGGCAAG TACGCGGTGC TGAACATGAT TCCGTACAAC ACGGTGCCCG ATCTGCCGTA CACGCGGCCG TCGTGGGAGG CCGCCGCCGC GCTGGCGCGC ACGCTGCACC GGCGCGGCAT CCTGACCAAG CTGCGGCAAT CGGCCGGGCA GGACGTGGAG GGTGGCTGCG GCCAGCTGCG CGCGCGTGAG CTGGCGCCGT CGGCGCGGCG CATCGAGATC CGGCCGGTCG CCTCGCTGCC CTGA
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Protein sequence | MRIDFIRQRL RAQGAKPCHE QRILRIWAQV LPTEGGRSRP DDFLPQAVRD AMPALLADLD GLARLRSQHP GEDGSARLLV ELADGQTVES VLLPRDGLCV STQVGCAVGC VFCMTGREGL LRQVGSAEIV AQVVLARRQR LVKKVVFMGM GEPAHNLDNV MEAIDFLGTT GAIGHKNLVF STVGDPRVFE RLPLGPVKPA LALSLHTTRA DLRAQLLPRA PRMDPADLVE RAEAYARATS YPIQYQWTLL EGINDGPDEV EGIVRLLHGK YAVLNMIPYN TVPDLPYTRP SWEAAAALAR TLHRRGILTK LRQSAGQDVE GGCGQLRARE LAPSARRIEI RPVASLP
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