| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2491 |
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| Symbol | |
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| ID | 6160984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2714479 |
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| End bp | 2715138 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665261 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_001791521 |
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| Protein GI | 171059172 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0000000498099 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATGACA AGCTGCTCAT CGCCTCGCGC GTGGCCCAGG AACTGCGCCC CGGCACGCTC
GTCAACCTCG GCATCGGCCT GCCCACGCTG GTCGCCGGCC TGGTGCCGCG CGACGCGCAC
ATCTTCTTCC AGTCCGAGAA CGGCATCATC GGCATGCAGT CGGTGCCCGA ACACGGCCTC
GAAGACGACG ACCTGACCGA CGCGGGCGGG CGCCCGATCA GCGCCCTGCC CGGCGCGGCC
ACCTTCGACA GCGCGATGTC CTTCGGCCTC ATCCGCGGCG GCCACCTCGA CGTCACGGTG
CTCGGCGGCC TGCAGGTCGA CCGCAACGGC CGGCTGGCCA ACTGGATGGT GCCCGGCAAG
ATGGTGCCCG GCATGGGCGG CGCGATGGAC CTCGTCACCG GCGCGCGCCG CGTGATCGTG
GCCATGACGC ACACCGCCAA GGGCGAGCAC AAGATCGTCG ACGCGCTGAC GCTGCCGCTG
ACCTCGTCGC GCTGCGTCGA CCTGATCGTC ACCGAACTGG CGGTGCTGCT GCCGACGTCG
GCCGGCATGG TGCTCAAGGA ACTGGCGCCG GGCGTGACGG TCGAGCAGGT GCAGGCGGCC
ACCGGCACCC GGCTGATCGT GCCCGAGGAC GTGCCGACGA TGGGCACCGT GCAGTCCTGA
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| Protein sequence | MDDKLLIASR VAQELRPGTL VNLGIGLPTL VAGLVPRDAH IFFQSENGII GMQSVPEHGL
EDDDLTDAGG RPISALPGAA TFDSAMSFGL IRGGHLDVTV LGGLQVDRNG RLANWMVPGK
MVPGMGGAMD LVTGARRVIV AMTHTAKGEH KIVDALTLPL TSSRCVDLIV TELAVLLPTS
AGMVLKELAP GVTVEQVQAA TGTRLIVPED VPTMGTVQS
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