| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2479 |
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| Symbol | |
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| ID | 6160465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2698768 |
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| End bp | 2700084 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641665249 |
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| Product | glucose/sorbosone dehydrogenase-like protein |
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| Protein accession | YP_001791509 |
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| Protein GI | 171059160 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000000414902 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGAGT CCGGAGTTCT CGCGCAGGTT TTTGCACGCG TGGTCGCCCG CGTGGGCGAC
GCGGCGATCC TGTGGCGGCG CCTGCAGGGC GGCGCGCAGG CGCAGGCGCT CGGCAGCACG
CCGACGATTC CCGCGGCCCG GCCGCAAGGC CGGCTGCCCA CGCTGAAGAT GCCGACCGCC
AGGGGCTGGG CGCCGGGGCA CAAGCCGGTG GCCGCGCCGG GTCTGCGGGT CGACGCCTAC
GCCAGCGGCC TCGATCACCC GCGCTGGATG CTGGTGCTGC CCAACGGCGA TGTCACCGTG
GCCGAGGCCT GTTTCCTGCC CGGCACCGTC AACTCGCTGT TCGACTACGC GATGCTCAGC
ACGATGAAAC GTGCGGCCGC CACCGGCATC AGCCCGAACC GCATCACGCT GCTGCGCGAC
GCCGATGGCG ACGGCGTGGC CGAAACCCGC ACGACCTTCC TCGAAGGCCT GAGCCAGCCC
TTCGGCATGG CGCTGCTGGG CGAGACCTTC TACGTCGGCA ACACCGACGC GCTGCTGGCT
TTCCCGTACA CGAGCGGCGC CACCCGCATC ACCGCGCCGG CCCGCCAGCT GGCGGCGTTC
AAGCCCGGCG GGCACTGGAC CCGCAGCCTG CTGCCGAGCG CGGACGGCAG CAAGCTGTTC
GTCGGCGTCG GCTCGCTCAG CAACATCGCC GAGAGCGGCT TCGAGGTCGA GCAGGGCCGC
GCCTGCATCC ACGAGGTCGA CCTGGCCAGC GGCAGCAGCC GGATCTTTGC CGGCGGCCTG
CGCAACCCGG TGGGCCTGGC CTGGCAGCCG CAGACCGGCG AGCTCTGGAC GGTCGTCAAC
GAGCGCGACG GCCTGGGCGA CGAGACGCCG CCCGACTACC TGACCTCGGT GCGCGACGGC
GGCTTCTACG GCTGGCCCTA CAGCTACTGG GGGCCGACGG TGGACGACCG GGTGCCGCAG
GATCCGGCGG CCGTCGCCCG CGCCATCGCG CCCGATTACG CGCTGGGCGG GCACACCGCC
TCGCTGGGCC TGTGCTGGCT GCCGGCCGGC ACGCTGCCGG GCTTCCCGGA CGGCATGGTC
ATCGGCCAGC ACGGTTCGTG GAACCGCAGC ACGCTGAGCG GCTACAAGGT GGTCTTCGTG
CCCTTCGTCG ACGGTCGCCC GGCCGGGCCG CCGCGCGACA TCCTGTCGGG CTTTCTGGCG
CCCGACGAGA GCCAGTCCTA CGGCCGCCCG GTCGGCGTCG TGATCGGGCC CGACGCGGCC
TCGCTGCTGG TGGCCGACGA CGTGGGCAAC GTCATCTGGC GCGTGACGTC GGCGTAG
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| Protein sequence | MNESGVLAQV FARVVARVGD AAILWRRLQG GAQAQALGST PTIPAARPQG RLPTLKMPTA
RGWAPGHKPV AAPGLRVDAY ASGLDHPRWM LVLPNGDVTV AEACFLPGTV NSLFDYAMLS
TMKRAAATGI SPNRITLLRD ADGDGVAETR TTFLEGLSQP FGMALLGETF YVGNTDALLA
FPYTSGATRI TAPARQLAAF KPGGHWTRSL LPSADGSKLF VGVGSLSNIA ESGFEVEQGR
ACIHEVDLAS GSSRIFAGGL RNPVGLAWQP QTGELWTVVN ERDGLGDETP PDYLTSVRDG
GFYGWPYSYW GPTVDDRVPQ DPAAVARAIA PDYALGGHTA SLGLCWLPAG TLPGFPDGMV
IGQHGSWNRS TLSGYKVVFV PFVDGRPAGP PRDILSGFLA PDESQSYGRP VGVVIGPDAA
SLLVADDVGN VIWRVTSA
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