| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2465 |
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| Symbol | |
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| ID | 6162558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2677422 |
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| End bp | 2678132 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665235 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_001791495 |
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| Protein GI | 171059146 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000000493409 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCAACA ACGCAATCTT TGCCCGCCTC GCCAACCTGT GGTCGGGGTT CATCTCACTG
TGGGTGTCCG ACGTCGAGAA GGCCCATCCG GAGATCGCGT ACCAGAACGC GATCGCCTCG
ATGATCGAGA AGTACACCCA GCTCAAGGCC GCGACCGGTG CCATCATCGC GCGCCGCCAG
GAGATCACCG CGCGGCTGGA GGCGCAGGAG CGCGAGCTGG CCAGCGTCAG CGCCGACCTC
GAGACCGCGT TGGCCACCAA CCAGGACGAC CTGGCCGTGG TGCTGATCCA GAAGAAGAAC
GCGGTCGATG CGGCGCTGGT CGAACTGCGC GCCGATGCCG CCCAGGCCAC CTCGGATGCC
GACACCGCCA AGGATTCGCT GATGCAGGTG AAGTCCGAGA TCGACAAGCT CAAAGCCGAG
AAGGACCGCA TGCTCGCGCA GATGCACAGC GCGCAGGCGC GGCTGAAGAT CCAGGGCCAG
CTCGACGGCC TGTCGGTCGA CGCCGAGGTG CAGGCGCTGG GTGCCGTGCG CGACCACATC
AAGAGCCAGG TGGCGCAGGC CAGCCTGGGC GCCGAGCTGC GCGAATCCGA CCTCGACGTG
CGCCTGAACA AGCTGCGCCA GAGCAGCGGT GCCGTCACCG CCAAGGCGCA GCTCGACGCC
CTGAAGGCGG CGCGGGCGGC GGCGCAGTCC GCACCGGTCA AGAACCTCTG A
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| Protein sequence | MANNAIFARL ANLWSGFISL WVSDVEKAHP EIAYQNAIAS MIEKYTQLKA ATGAIIARRQ
EITARLEAQE RELASVSADL ETALATNQDD LAVVLIQKKN AVDAALVELR ADAAQATSDA
DTAKDSLMQV KSEIDKLKAE KDRMLAQMHS AQARLKIQGQ LDGLSVDAEV QALGAVRDHI
KSQVAQASLG AELRESDLDV RLNKLRQSSG AVTAKAQLDA LKAARAAAQS APVKNL
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