| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2459 |
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| Symbol | |
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| ID | 6163348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2671031 |
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| End bp | 2671963 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665229 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001791489 |
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| Protein GI | 171059140 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00000478231 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGCAGG CCTGCGGGCG GCTGCGGTTC CGGCATCTGC AGTTCCTGGA CATCCTCGGC
CAGACCCGCA ACCTGCGGCT CACCGCCGAG CAGATGCACA TCACGCAGCC GGCGGCCACC
AAGATCCTGA TGGACATCGA GCAGATCCTG GAGGCGCGCC TGTTCGACCG GCTGTCGCGC
GGCATGCGGC CCAACGAGCT GGGCCTGTTC ACGCTGCGTT ATGCCGGCGT GGCACTGGCC
GGGCATCGCA AGTTCGTCGA TGAATTCAAT GCCCTGCGGC ACGGCGGCCA CGGGCACCTG
ACGATCGGTG CGATCACCGG CTCGGCCGCC CACCTGCTGA TGGCGTCGGT GGCGGAGATC
CAGCGCCTGC GGCCGCTGCT GGTGCTCAAG ATCCTGGAGC AGAGCAGCGA CCAGCTGGTG
GTCTGGCTGG CCGAACGCAA GATCGACCTG ATGATCGGGC GCTTCACGGA CGAGGCGCAG
AAGGCCCAGT TCCAGTACGA GCGCCTGGCC AGCGAGCAGC TGCAGGTGGT GGCCGGCGTC
GATCACCCCT TGCGCGGCGC ACTCGACCTG GAGCTGACCC AGCTGGCGCA CTGGCCGTGG
ATCCTCTACC CGACCTCGAC GGCGGTGCGC AGGGTGTGCG ACGACATCTT CGGCCGCAAC
GGCCTGGCGC TCGCCTGCGG CGTGGTCGAG ACGCCCTCGT TCCTGTTCGC GCTGGAGCTG
ATGCAGCGCA CCGACATGCT GTCGCTGCAG CCCGCGGCGC TGGTCGACAA GTACGTGAAG
AAGGGCCTGC TGGCGCGCAT CCCGGTCGAG CTGCCGGACC GCCTGCCCGA CTACGGCCTG
ATCACCCGGC TCGACGAGCC GCCGACACCG GCGGCGCAGG CGTTCACGGA CGTGTTGCGG
ACGCTGGCCG GCACCGCTGC AGAAACCGGC TGA
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| Protein sequence | MAQACGRLRF RHLQFLDILG QTRNLRLTAE QMHITQPAAT KILMDIEQIL EARLFDRLSR
GMRPNELGLF TLRYAGVALA GHRKFVDEFN ALRHGGHGHL TIGAITGSAA HLLMASVAEI
QRLRPLLVLK ILEQSSDQLV VWLAERKIDL MIGRFTDEAQ KAQFQYERLA SEQLQVVAGV
DHPLRGALDL ELTQLAHWPW ILYPTSTAVR RVCDDIFGRN GLALACGVVE TPSFLFALEL
MQRTDMLSLQ PAALVDKYVK KGLLARIPVE LPDRLPDYGL ITRLDEPPTP AAQAFTDVLR
TLAGTAAETG
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