| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2436 |
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| Symbol | |
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| ID | 6163642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2645587 |
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| End bp | 2646318 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665206 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001791466 |
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| Protein GI | 171059117 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.747053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGCCA CACCCCCGCC TTCGCCAACA GCCGTTTCGA TTTCTGCCGC CGCGGCGTCC
GACGACACCC GCGCGATCGA AACACCCGTC GCCCCCGCCC ACCAGCGCCG CAAGGCCGAG
CGCCCGCACG AGCTGGTCGA TGCCGCGCTG GACCTGTTTG TCGAGAAGGG TTTCGCCGCC
ACCCGCATCG ACGAGGTGGC GCGCCGCGCG GGTGTCTCCA AGGGCACGCT CTACCTCTAC
TACGCCAGCA AGGAAGAGCT GCTGAAGGCG GTGATCCGCG AGCGGCTGTC GACCGAGATC
GCCGCCGCCG CGCTGACCGT GGCCGAGCAC CGCGGCAGCA GTGCCGACCT GCTGACCGGC
CCGCTGGCGG CCTGGTGGGC GCGCGTGATC GCCAGCCAGG CGTCGGGCGT GTTCAAGCTC
ATCATCACCG AGGTGCGCAA CTTCCCCGAG ATCGCCGAGT TCTATCGCCA CGAGGTGATC
GAGCCCGGCC ACGCGCTGAT CGGCCGGATC CTGCAGCGCG GCATCGACGG CGGCGAGTTC
CGGCCCGTCG ACATCGACGC CACGGTGCAT TCGCTGCTGC TGCCGATGGT GATGCTGTGC
ATCCACCGCC ACTCGCTGGG CGTCTGCCAG CCCAACGAGG CGCTGCAGGA CCCGCTCGTG
TTCATCCAGC ACCACATGCA CCTGATCCTG CGCGGGCTGG CCCGGCCGGA CCAGGCGCCG
AACGCAAGCT GA
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| Protein sequence | MPATPPPSPT AVSISAAAAS DDTRAIETPV APAHQRRKAE RPHELVDAAL DLFVEKGFAA
TRIDEVARRA GVSKGTLYLY YASKEELLKA VIRERLSTEI AAAALTVAEH RGSSADLLTG
PLAAWWARVI ASQASGVFKL IITEVRNFPE IAEFYRHEVI EPGHALIGRI LQRGIDGGEF
RPVDIDATVH SLLLPMVMLC IHRHSLGVCQ PNEALQDPLV FIQHHMHLIL RGLARPDQAP
NAS
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