| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2423 |
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| Symbol | |
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| ID | 6164132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2631433 |
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| End bp | 2632506 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641665193 |
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| Product | porin |
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| Protein accession | YP_001791453 |
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| Protein GI | 171059104 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0610665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACAAGA ACGCCATCAC CCTCGCCCTG CTCGCCACCG TCGTCGCCCC TGCGATGGCA
CAGAGCACCG TCAGCGTCTC GGGCATCGCC GATGCCGGCC TGCGCAGCGT CAGCAACAGC
GGGCTGGCCT CGGTGCGCTC GATGGTCAGC GGCGCCAACG CCACCAGCCG CCTCGTGATC
CGCGGCACCG AGGACCTCGG CAACGGCAAC AGCGCCGGCT TCCACCTCGA ACACGGCCTG
GCGCTGACCA ACGGCACGGC CGCGTCGAGC ACGCAGTTCT GGGACCGCCG CTCGACCGTC
AGCCTGGCCA GCAAGACCGC CGGCGAGCTG CGGCTGGGGC GCGACTTCGT GCCGAGCTAT
TCGAACTGGA GCCGCTACGA CCCGTTCAGC CACGTCGGTG CGGCGAGCGC GGGCAACTTC
GTCTCGGCCA CGCCGACCGG GCCGATCCGC AGCGCCTTCG GCAGCAACGG CAACACCACG
GTGCGCGCCA ACAGCGCCTT CCAGTACCTG CTGCCCGGCG GCCTGGGCGG CCTCGAAGGC
GGCCTGATGC TGACCGCGGC CGGCGCACGC TCGGCAGCCG ACGGCCAGAA CAAGGTGACG
GGCCTGCGCC TGGGCTGGGC CGGCGGTCCG ATGGGCGTGT CGGCGGCCAG CACCACCACC
GAAAACGACC TGACGACCAG CGGCAGGTTC ACCGACCGCG CGCTCGGCGC CAGCTACGAC
CTGGGCATGG TGCGTGTCAG CGCGGTCGTG CGGCAGTTCA AGCAGGCCGG CGCCAAGCAG
ACCAACCAGC TGATCGGCGC CTGGATCCCG GTCGGCCAGG GCGAGATCAA GGCCTCATGG
CAGCGCGCCG ACCTGGCCGG CCAGGTCGGC GCCACGGTGA TCGACGCCAA CGACGCCCGG
CAGATCGGCC TGGGCTACGT GCACAACCTG TCCAGGCGCA CGGCGCTCTA CACCACGTAC
TCGCGCATCA CCAACAGCGG CGCCAGCGTG CGGGTGGTGC CCGGCGGGAC GAGCGGCATG
GCGGCCGGCG GCACGTCCAA GGGCTTCGAG GCCGGCGTGC GCCACAACTT CTGA
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| Protein sequence | MNKNAITLAL LATVVAPAMA QSTVSVSGIA DAGLRSVSNS GLASVRSMVS GANATSRLVI
RGTEDLGNGN SAGFHLEHGL ALTNGTAASS TQFWDRRSTV SLASKTAGEL RLGRDFVPSY
SNWSRYDPFS HVGAASAGNF VSATPTGPIR SAFGSNGNTT VRANSAFQYL LPGGLGGLEG
GLMLTAAGAR SAADGQNKVT GLRLGWAGGP MGVSAASTTT ENDLTTSGRF TDRALGASYD
LGMVRVSAVV RQFKQAGAKQ TNQLIGAWIP VGQGEIKASW QRADLAGQVG ATVIDANDAR
QIGLGYVHNL SRRTALYTTY SRITNSGASV RVVPGGTSGM AAGGTSKGFE AGVRHNF
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