Gene Lcho_2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2420 
Symbol 
ID6163794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp2627502 
End bp2628233 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content69% 
IMG OID641665190 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001791450 
Protein GI171059101 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.521477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATATG AACTCCACTA TTGGCCGACC ATCCAGGGCC GCGGCGAATT CGTGCGGCTG 
GCCCTGGAAG CGGCCGGCGC ACCCTACATC GACGTGGCGC GCGGCGCAGA AGAAGCGGGC 
CTGGGCGTGC CCGCCATGCA GCGCTGCCTG CACGACCGCA AGCTGGTGCA TCCGCCGTTC 
GCGCCGCCGT TCCTGATCGA CGGCAACGTC GTCGTCGCAC AGACCGCCGC CATCCTGCAG 
TACCTGGCGC CGACGCTGAA ACTGGTCGCT CGCAGCGAGC AGCTGCGGGT CTGGACGCAG 
CAGATCCAGC TGACCATCGC CGACATGGTC GACGAGGCCC ACGACACCCA TCACCCGGTC 
GGCGCCGGCC TGTACTACGA AGACCAGAAA CCCGAAGCGC TGCGCCGCGC GACCGATTTC 
TGCCGCGTCC GCATGCCCAA GTTCCTGCAG TGGTTCGAAG CCATCGTGGT GCGCAACACG 
GCCGGCACGC GGCACCTGGT CGGCGGCAAG CTGAGCTACG CCGACCTGTC GCTGTTCCAG 
CTCGTCGAGG GCCTGCGCTA CGCCTTCCCG AAGGCCGCGC AGCAGGCGCT GGCCAGCACA 
CCCGCCGTCG TGCAACTGCA CGACCGCATC GCCGACCTGC CCCGCGTGGC CGCGTATCTG 
CGCAGCGACC GGCGCATCCC GTTCAACGAG CAGGGCATCT TCCGCCGCTA CCCCGAGCTC 
GACATCGCGT AG
 
Protein sequence
MAYELHYWPT IQGRGEFVRL ALEAAGAPYI DVARGAEEAG LGVPAMQRCL HDRKLVHPPF 
APPFLIDGNV VVAQTAAILQ YLAPTLKLVA RSEQLRVWTQ QIQLTIADMV DEAHDTHHPV 
GAGLYYEDQK PEALRRATDF CRVRMPKFLQ WFEAIVVRNT AGTRHLVGGK LSYADLSLFQ 
LVEGLRYAFP KAAQQALAST PAVVQLHDRI ADLPRVAAYL RSDRRIPFNE QGIFRRYPEL 
DIA