| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2379 |
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| Symbol | |
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| ID | 6159933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2584987 |
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| End bp | 2586195 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665148 |
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| Product | amidohydrolase |
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| Protein accession | YP_001791409 |
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| Protein GI | 171059060 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCT ACCTGCTGGA CGCGATGCAG ACGCGCATCG GTGAGTTCAT CCACCTGCGC
CGCGACATCC ACCGCCATCC CGAACTCGCC TTCGAGGAGC ACCGCACCGC CGCGCTGGTG
GCCGACAAGC TCGAAGGCTG GGGCTACGAG GTCGAACGCG GTGTGGGCGG CACCGGCGTC
GTCGCGCGGC TGGTGCGCGG CGAGACCGAC GAGAAAGGCA CACGCCGCCT CGGCCTGCGT
GCCGACATGG ACGCGCTGCC GATCACCGAG GCCAGCGGCG CCGAATGGGC CAGTTGCAAG
CCGGGCCTGA TGCACGCCTG CGGCCACGAC GGCCACACCG CGATGCTGCT GGCCGCTGCC
CGTCAGCTGG CCGAACACGG CCGCTTCAAC GGCACGCTGA ACCTGATCTT CCAGCCCGCC
GAAGAGGGTG GCGGCGGCGC GCTGCGCATG ATGGAAGACG GGCTGTTCGA GCGTTACCCG
TGCGACGCGA TCTTCGCGAT GCACAACATG CCCGGCGTGC CGCAGGGTCG TCTGGTGCTG
CGCGAAGGCG CGGCGATGGC ATCGAGCGAC TACGCCACCA TCACGCTCGA CGGCATCGGC
GGCCACGGCG CGATGCCGCA CCGCGCGGCC GACCCGATCG TGGCGGCGGC CGGCATCGTG
ATGGCGCTGC AGAGCATCGT CTCGCGCAAC GTCGACCCGC TGCAGATGGC GGTGGTCACG
GTGGGTGCGC TGCATGCGGG CAAGGCCAAC AACGTGATCC CGGCCAGCGC CACGCTGGAG
CTGAGTGTGC GTGCGCTCGA CCGCGAGGTG CGCGTGCTGC TGGCGCAGCG CATCAAGGCG
CTGGTGGCCG CGCAGGCCCA GAGCTACGGC GTCACCGCCC GCATCGACTG GCGGCCGGGT
TACGCGGTGC TGGTCAACAG CGCGGCGGAA ACCGCCTTCG CACGCGAGGT GGCGATCGAC
CTGGTCGGCG CCGACCGCGT CACGCAACAA GGCCCGGCGC TGAGCGGCAG CGAGGATTTC
GCCTTCATGC TCGAACGCGT GCCGGGCAGC TACCTGCTGA TCGGCAACGG CGATGGCGCG
AGCCCGGGTG CCTGCATGGT GCACAACCCC GGCTACGACT TCGACGACGC CAACATCGCC
ATCGGCGCGG CCTACTGGGT GGCGCTGACC GAACGATTCC TGTCGATCCC TGAGAACAGC
GAGGGCTGA
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| Protein sequence | MSSYLLDAMQ TRIGEFIHLR RDIHRHPELA FEEHRTAALV ADKLEGWGYE VERGVGGTGV
VARLVRGETD EKGTRRLGLR ADMDALPITE ASGAEWASCK PGLMHACGHD GHTAMLLAAA
RQLAEHGRFN GTLNLIFQPA EEGGGGALRM MEDGLFERYP CDAIFAMHNM PGVPQGRLVL
REGAAMASSD YATITLDGIG GHGAMPHRAA DPIVAAAGIV MALQSIVSRN VDPLQMAVVT
VGALHAGKAN NVIPASATLE LSVRALDREV RVLLAQRIKA LVAAQAQSYG VTARIDWRPG
YAVLVNSAAE TAFAREVAID LVGADRVTQQ GPALSGSEDF AFMLERVPGS YLLIGNGDGA
SPGACMVHNP GYDFDDANIA IGAAYWVALT ERFLSIPENS EG
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